Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL9A1P20849 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
COL9A1P20849 STARP1-201ENST00000397973 869 ntBASIC19.89■□□□□ 0.77
COL9A1P20849 AL035633.1-201ENST00000406139 838 ntBASIC19.89■□□□□ 0.77
COL9A1P20849 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COL9A1P20849 RPS8P6-201ENST00000426177 609 ntBASIC19.89■□□□□ 0.77
COL9A1P20849 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL9A1P20849 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.89■□□□□ 0.77
COL9A1P20849 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
COL9A1P20849 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.89■□□□□ 0.77
COL9A1P20849 AC012615.1-201ENST00000565797 1299 ntBASIC19.89■□□□□ 0.77
COL9A1P20849 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC19.89■□□□□ 0.77
COL9A1P20849 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.89■□□□□ 0.77
COL9A1P20849 AP002414.4-201ENST00000589764 1148 ntBASIC19.89■□□□□ 0.77
COL9A1P20849 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.89■□□□□ 0.77
COL9A1P20849 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.89■□□□□ 0.77
COL9A1P20849 AC092364.2-202ENST00000597012 1073 ntBASIC19.89■□□□□ 0.77
COL9A1P20849 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.89■□□□□ 0.77
COL9A1P20849 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
COL9A1P20849 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL9A1P20849 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL9A1P20849 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL9A1P20849 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.88■□□□□ 0.77
COL9A1P20849 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL9A1P20849 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.88■□□□□ 0.77
COL9A1P20849 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL9A1P20849 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.88■□□□□ 0.77
COL9A1P20849 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
COL9A1P20849 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
COL9A1P20849 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.88■□□□□ 0.77
COL9A1P20849 YBX1P10-201ENST00000444752 975 ntBASIC19.88■□□□□ 0.77
COL9A1P20849 SPDYE13P-201ENST00000445314 798 ntBASIC19.88■□□□□ 0.77
COL9A1P20849 KRT18P31-201ENST00000506277 1292 ntBASIC19.88■□□□□ 0.77
COL9A1P20849 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC19.88■□□□□ 0.77
COL9A1P20849 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.88■□□□□ 0.77
COL9A1P20849 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC19.88■□□□□ 0.77
COL9A1P20849 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
COL9A1P20849 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL9A1P20849 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.88■□□□□ 0.77
COL9A1P20849 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.88■□□□□ 0.77
COL9A1P20849 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.88■□□□□ 0.77
COL9A1P20849 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL9A1P20849 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
COL9A1P20849 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL9A1P20849 BX119927.1-201ENST00000636596 1552 ntBASIC19.87■□□□□ 0.77
COL9A1P20849 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL9A1P20849 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COL9A1P20849 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.87■□□□□ 0.77
COL9A1P20849 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
COL9A1P20849 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.87■□□□□ 0.77
COL9A1P20849 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
COL9A1P20849 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
COL9A1P20849 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL9A1P20849 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COL9A1P20849 CALY-203ENST00000368558 825 ntTSL 5 BASIC19.87■□□□□ 0.77
COL9A1P20849 AC004980.1-204ENST00000429707 299 ntBASIC19.87■□□□□ 0.77
COL9A1P20849 TSPY17P-201ENST00000450329 467 ntBASIC19.87■□□□□ 0.77
COL9A1P20849 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.87■□□□□ 0.77
COL9A1P20849 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL9A1P20849 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
COL9A1P20849 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
COL9A1P20849 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.87■□□□□ 0.77
COL9A1P20849 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.87■□□□□ 0.77
COL9A1P20849 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
COL9A1P20849 AP001005.1-201ENST00000571755 1248 ntBASIC19.87■□□□□ 0.77
COL9A1P20849 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.87■□□□□ 0.77
COL9A1P20849 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
COL9A1P20849 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.87■□□□□ 0.77
COL9A1P20849 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL9A1P20849 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.87■□□□□ 0.77
COL9A1P20849 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.86■□□□□ 0.77
COL9A1P20849 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
COL9A1P20849 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL9A1P20849 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL9A1P20849 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
COL9A1P20849 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
COL9A1P20849 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.86■□□□□ 0.77
COL9A1P20849 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL9A1P20849 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL9A1P20849 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.86■□□□□ 0.77
COL9A1P20849 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL9A1P20849 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COL9A1P20849 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.86■□□□□ 0.77
COL9A1P20849 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.86■□□□□ 0.77
COL9A1P20849 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.86■□□□□ 0.77
COL9A1P20849 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COL9A1P20849 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.86■□□□□ 0.77
COL9A1P20849 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
COL9A1P20849 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
COL9A1P20849 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.86■□□□□ 0.77
COL9A1P20849 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
COL9A1P20849 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
COL9A1P20849 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL9A1P20849 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.86■□□□□ 0.77
COL9A1P20849 SMG8-203ENST00000578922 2178 ntBASIC19.85■□□□□ 0.77
COL9A1P20849 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL9A1P20849 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL9A1P20849 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
COL9A1P20849 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.85■□□□□ 0.77
COL9A1P20849 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms