Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
PRKCAP17252 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PRKCAP17252 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PRKCAP17252 TSPY20P-201ENST00000450910 630 ntBASIC17.85■□□□□ 0.45
PRKCAP17252 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.85■□□□□ 0.45
PRKCAP17252 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PRKCAP17252 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.85■□□□□ 0.45
PRKCAP17252 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.85■□□□□ 0.45
PRKCAP17252 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.85■□□□□ 0.45
PRKCAP17252 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.85■□□□□ 0.45
PRKCAP17252 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.85■□□□□ 0.45
PRKCAP17252 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.85■□□□□ 0.45
PRKCAP17252 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PRKCAP17252 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PRKCAP17252 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.85■□□□□ 0.45
PRKCAP17252 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
PRKCAP17252 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PRKCAP17252 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PRKCAP17252 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PRKCAP17252 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PRKCAP17252 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.84■□□□□ 0.45
PRKCAP17252 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRKCAP17252 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PRKCAP17252 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRKCAP17252 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRKCAP17252 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRKCAP17252 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRKCAP17252 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PRKCAP17252 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PRKCAP17252 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRKCAP17252 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRKCAP17252 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRKCAP17252 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.84■□□□□ 0.45
PRKCAP17252 FAM201B-201ENST00000458407 597 ntBASIC17.84■□□□□ 0.45
PRKCAP17252 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRKCAP17252 MTDHP1-201ENST00000605323 784 ntBASIC17.84■□□□□ 0.45
PRKCAP17252 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.84■□□□□ 0.45
PRKCAP17252 AC073648.6-201ENST00000641589 218 ntBASIC17.84■□□□□ 0.45
PRKCAP17252 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRKCAP17252 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRKCAP17252 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PRKCAP17252 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRKCAP17252 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
PRKCAP17252 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PRKCAP17252 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.84■□□□□ 0.45
PRKCAP17252 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.45
PRKCAP17252 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
PRKCAP17252 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.83■□□□□ 0.45
PRKCAP17252 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PRKCAP17252 AP006587.1-201ENST00000534129 1502 ntBASIC17.83■□□□□ 0.45
PRKCAP17252 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.83■□□□□ 0.45
PRKCAP17252 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PRKCAP17252 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.83■□□□□ 0.45
PRKCAP17252 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.83■□□□□ 0.45
PRKCAP17252 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRKCAP17252 AC120498.9-201ENST00000339021 3867 ntBASIC17.83■□□□□ 0.44
PRKCAP17252 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRKCAP17252 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PRKCAP17252 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
PRKCAP17252 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRKCAP17252 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRKCAP17252 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRKCAP17252 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
PRKCAP17252 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRKCAP17252 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.83■□□□□ 0.44
PRKCAP17252 PRKY-204ENST00000533551 1019 ntBASIC17.83■□□□□ 0.44
PRKCAP17252 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.83■□□□□ 0.44
PRKCAP17252 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.83■□□□□ 0.44
PRKCAP17252 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRKCAP17252 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
PRKCAP17252 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
PRKCAP17252 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRKCAP17252 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRKCAP17252 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.83■□□□□ 0.44
PRKCAP17252 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRKCAP17252 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
PRKCAP17252 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.82■□□□□ 0.44
PRKCAP17252 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRKCAP17252 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.82■□□□□ 0.44
PRKCAP17252 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PRKCAP17252 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
PRKCAP17252 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.82■□□□□ 0.44
PRKCAP17252 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRKCAP17252 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PRKCAP17252 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRKCAP17252 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PRKCAP17252 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.82■□□□□ 0.44
PRKCAP17252 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.82■□□□□ 0.44
PRKCAP17252 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
PRKCAP17252 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRKCAP17252 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRKCAP17252 AC128676.1-201ENST00000454392 318 ntBASIC17.82■□□□□ 0.44
PRKCAP17252 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.82■□□□□ 0.44
PRKCAP17252 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.82■□□□□ 0.44
PRKCAP17252 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
PRKCAP17252 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
PRKCAP17252 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PRKCAP17252 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PRKCAP17252 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
PRKCAP17252 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms