Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CSF1P09603 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSF1P09603 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSF1P09603 TSPY6P-201ENST00000448518 926 ntBASIC16.68■□□□□ 0.26
CSF1P09603 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC16.68■□□□□ 0.26
CSF1P09603 KRT18P6-201ENST00000555540 1265 ntBASIC16.68■□□□□ 0.26
CSF1P09603 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CSF1P09603 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CSF1P09603 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.68■□□□□ 0.26
CSF1P09603 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CSF1P09603 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CSF1P09603 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CSF1P09603 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSF1P09603 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CSF1P09603 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSF1P09603 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSF1P09603 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.68■□□□□ 0.26
CSF1P09603 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.67■□□□□ 0.26
CSF1P09603 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CSF1P09603 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CSF1P09603 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CSF1P09603 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CSF1P09603 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CSF1P09603 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CSF1P09603 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CSF1P09603 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CSF1P09603 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC16.67■□□□□ 0.26
CSF1P09603 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC16.67■□□□□ 0.26
CSF1P09603 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC16.67■□□□□ 0.26
CSF1P09603 UBE2DNL-204ENST00000602536 740 ntBASIC16.67■□□□□ 0.26
CSF1P09603 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CSF1P09603 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CSF1P09603 GAMT-205ENST00000640762 751 ntTSL 5 BASIC16.67■□□□□ 0.26
CSF1P09603 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CSF1P09603 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CSF1P09603 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CSF1P09603 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSF1P09603 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.66■□□□□ 0.26
CSF1P09603 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.66■□□□□ 0.26
CSF1P09603 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSF1P09603 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CSF1P09603 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSF1P09603 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CSF1P09603 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CSF1P09603 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSF1P09603 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.66■□□□□ 0.26
CSF1P09603 CDV3P1-201ENST00000471403 739 ntBASIC16.66■□□□□ 0.26
CSF1P09603 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSF1P09603 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC16.66■□□□□ 0.26
CSF1P09603 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC16.66■□□□□ 0.26
CSF1P09603 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC16.66■□□□□ 0.26
CSF1P09603 SLC7A5P2-201ENST00000553010 536 ntBASIC16.66■□□□□ 0.26
CSF1P09603 RGMA-211ENST00000557420 989 ntTSL 3 BASIC16.66■□□□□ 0.26
CSF1P09603 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSF1P09603 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CSF1P09603 FGF8-207ENST00000618991 856 ntTSL 3 BASIC16.66■□□□□ 0.26
CSF1P09603 AL050303.2-201ENST00000619798 666 ntBASIC16.66■□□□□ 0.26
CSF1P09603 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSF1P09603 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSF1P09603 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CSF1P09603 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSF1P09603 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSF1P09603 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.66■□□□□ 0.26
CSF1P09603 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.66■□□□□ 0.26
CSF1P09603 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.65■□□□□ 0.26
CSF1P09603 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC16.65■□□□□ 0.26
CSF1P09603 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSF1P09603 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CSF1P09603 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CSF1P09603 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSF1P09603 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.65■□□□□ 0.26
CSF1P09603 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSF1P09603 AC087633.2-202ENST00000565166 1439 ntBASIC16.65■□□□□ 0.26
CSF1P09603 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSF1P09603 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CSF1P09603 AC020916.1-201ENST00000587762 1774 ntBASIC16.65■□□□□ 0.26
CSF1P09603 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC16.65■□□□□ 0.26
CSF1P09603 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CSF1P09603 OAS3-207ENST00000551007 998 ntTSL 2 BASIC16.65■□□□□ 0.26
CSF1P09603 DUX4L16-201ENST00000555130 1264 ntBASIC16.65■□□□□ 0.26
CSF1P09603 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CSF1P09603 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC16.65■□□□□ 0.26
CSF1P09603 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSF1P09603 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC16.65■□□□□ 0.26
CSF1P09603 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.65■□□□□ 0.26
CSF1P09603 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSF1P09603 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSF1P09603 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC16.65■□□□□ 0.26
CSF1P09603 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSF1P09603 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSF1P09603 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSF1P09603 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CSF1P09603 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.65■□□□□ 0.26
CSF1P09603 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.65■□□□□ 0.26
CSF1P09603 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSF1P09603 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CSF1P09603 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CSF1P09603 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CSF1P09603 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CSF1P09603 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms