Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CXCL1P09341 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CXCL1P09341 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CXCL1P09341 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CXCL1P09341 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CXCL1P09341 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CXCL1P09341 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CXCL1P09341 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CXCL1P09341 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CXCL1P09341 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC14.96□□□□□ -0.01
CXCL1P09341 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CXCL1P09341 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CXCL1P09341 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CXCL1P09341 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CXCL1P09341 AC126763.1-201ENST00000552015 2118 ntBASIC14.96□□□□□ -0.01
CXCL1P09341 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CXCL1P09341 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CXCL1P09341 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CXCL1P09341 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CXCL1P09341 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CXCL1P09341 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC14.96□□□□□ -0.01
CXCL1P09341 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CXCL1P09341 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CXCL1P09341 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CXCL1P09341 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CXCL1P09341 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
CXCL1P09341 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CXCL1P09341 KRT16P2-201ENST00000414673 1423 ntBASIC14.96□□□□□ -0.01
CXCL1P09341 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.96□□□□□ -0.01
CXCL1P09341 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC14.96□□□□□ -0.01
CXCL1P09341 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC14.96□□□□□ -0.01
CXCL1P09341 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC14.96□□□□□ -0.01
CXCL1P09341 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CXCL1P09341 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC14.96□□□□□ -0.01
CXCL1P09341 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CXCL1P09341 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
CXCL1P09341 RARRES2P11-201ENST00000635158 484 ntBASIC14.96□□□□□ -0.01
CXCL1P09341 CPT2-209ENST00000636935 803 ntTSL 5 BASIC14.96□□□□□ -0.01
CXCL1P09341 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CXCL1P09341 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CXCL1P09341 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC14.96□□□□□ -0.01
CXCL1P09341 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
CXCL1P09341 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CXCL1P09341 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CXCL1P09341 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CXCL1P09341 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CXCL1P09341 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CXCL1P09341 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CXCL1P09341 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CXCL1P09341 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC14.95□□□□□ -0.02
CXCL1P09341 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CXCL1P09341 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CXCL1P09341 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CXCL1P09341 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CXCL1P09341 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CXCL1P09341 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CXCL1P09341 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CXCL1P09341 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CXCL1P09341 AC073592.3-201ENST00000625118 1834 ntBASIC14.95□□□□□ -0.02
CXCL1P09341 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CXCL1P09341 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CXCL1P09341 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CXCL1P09341 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CXCL1P09341 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CXCL1P09341 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC14.95□□□□□ -0.02
CXCL1P09341 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC14.95□□□□□ -0.02
CXCL1P09341 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC14.95□□□□□ -0.02
CXCL1P09341 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC14.95□□□□□ -0.02
CXCL1P09341 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC14.95□□□□□ -0.02
CXCL1P09341 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CXCL1P09341 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CXCL1P09341 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
CXCL1P09341 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC14.95□□□□□ -0.02
CXCL1P09341 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CXCL1P09341 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CXCL1P09341 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CXCL1P09341 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CXCL1P09341 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CXCL1P09341 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC14.95□□□□□ -0.02
CXCL1P09341 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CXCL1P09341 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CXCL1P09341 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CXCL1P09341 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC14.95□□□□□ -0.02
CXCL1P09341 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.95□□□□□ -0.02
CXCL1P09341 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CXCL1P09341 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CXCL1P09341 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CXCL1P09341 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CXCL1P09341 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CXCL1P09341 AC009237.14-201ENST00000609975 1594 ntBASIC14.94□□□□□ -0.02
CXCL1P09341 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CXCL1P09341 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CXCL1P09341 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC14.94□□□□□ -0.02
CXCL1P09341 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CXCL1P09341 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CXCL1P09341 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CXCL1P09341 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CXCL1P09341 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CXCL1P09341 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CXCL1P09341 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms