Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
COL5A2P05997 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC25.49■■□□□ 1.67
COL5A2P05997 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC25.49■■□□□ 1.67
COL5A2P05997 AL121672.3-201ENST00000608644 468 ntBASIC25.49■■□□□ 1.67
COL5A2P05997 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
COL5A2P05997 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC25.49■■□□□ 1.67
COL5A2P05997 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
COL5A2P05997 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC25.49■■□□□ 1.67
COL5A2P05997 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
COL5A2P05997 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC25.49■■□□□ 1.67
COL5A2P05997 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
COL5A2P05997 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
COL5A2P05997 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC25.48■■□□□ 1.67
COL5A2P05997 AC011498.5-201ENST00000592027 486 ntBASIC25.48■■□□□ 1.67
COL5A2P05997 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
COL5A2P05997 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC25.48■■□□□ 1.67
COL5A2P05997 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
COL5A2P05997 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC25.48■■□□□ 1.67
COL5A2P05997 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC25.48■■□□□ 1.67
COL5A2P05997 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
COL5A2P05997 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
COL5A2P05997 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC25.48■■□□□ 1.67
COL5A2P05997 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
COL5A2P05997 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
COL5A2P05997 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
COL5A2P05997 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
COL5A2P05997 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
COL5A2P05997 STK25-234ENST00000535007 2459 ntTSL 2 BASIC25.48■■□□□ 1.67
COL5A2P05997 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
COL5A2P05997 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
COL5A2P05997 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
COL5A2P05997 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC25.47■■□□□ 1.67
COL5A2P05997 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC25.47■■□□□ 1.67
COL5A2P05997 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC25.47■■□□□ 1.67
COL5A2P05997 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
COL5A2P05997 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
COL5A2P05997 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
COL5A2P05997 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
COL5A2P05997 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
COL5A2P05997 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
COL5A2P05997 ANKRD18DP-204ENST00000455355 1975 ntBASIC25.47■■□□□ 1.67
COL5A2P05997 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC25.47■■□□□ 1.67
COL5A2P05997 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC25.47■■□□□ 1.67
COL5A2P05997 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC25.47■■□□□ 1.67
COL5A2P05997 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
COL5A2P05997 BX276092.5-203ENST00000456199 560 ntBASIC25.47■■□□□ 1.67
COL5A2P05997 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC25.47■■□□□ 1.67
COL5A2P05997 AP002414.4-201ENST00000589764 1148 ntBASIC25.47■■□□□ 1.67
COL5A2P05997 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC25.47■■□□□ 1.67
COL5A2P05997 AC036111.1-201ENST00000533973 1582 ntBASIC25.46■■□□□ 1.67
COL5A2P05997 AC093525.10-201ENST00000625130 1569 ntBASIC25.46■■□□□ 1.67
COL5A2P05997 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC25.46■■□□□ 1.67
COL5A2P05997 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
COL5A2P05997 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC25.46■■□□□ 1.67
COL5A2P05997 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
COL5A2P05997 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC25.46■■□□□ 1.67
COL5A2P05997 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC25.46■■□□□ 1.67
COL5A2P05997 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
COL5A2P05997 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
COL5A2P05997 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
COL5A2P05997 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC25.46■■□□□ 1.67
COL5A2P05997 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC25.46■■□□□ 1.67
COL5A2P05997 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
COL5A2P05997 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
COL5A2P05997 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
COL5A2P05997 AC023511.2-201ENST00000618803 211 ntBASIC25.46■■□□□ 1.67
COL5A2P05997 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC25.45■■□□□ 1.67
COL5A2P05997 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC25.45■■□□□ 1.67
COL5A2P05997 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
COL5A2P05997 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
COL5A2P05997 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
COL5A2P05997 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
COL5A2P05997 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
COL5A2P05997 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
COL5A2P05997 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
COL5A2P05997 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
COL5A2P05997 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
COL5A2P05997 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC25.45■■□□□ 1.66
COL5A2P05997 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
COL5A2P05997 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC25.45■■□□□ 1.66
COL5A2P05997 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC25.45■■□□□ 1.66
COL5A2P05997 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
COL5A2P05997 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC25.45■■□□□ 1.66
COL5A2P05997 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC25.45■■□□□ 1.66
COL5A2P05997 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC25.45■■□□□ 1.66
COL5A2P05997 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC25.45■■□□□ 1.66
COL5A2P05997 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
COL5A2P05997 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC25.45■■□□□ 1.66
COL5A2P05997 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
COL5A2P05997 GPAT2P1-201ENST00000444924 1672 ntBASIC25.44■■□□□ 1.66
COL5A2P05997 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC25.44■■□□□ 1.66
COL5A2P05997 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
COL5A2P05997 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC25.44■■□□□ 1.66
COL5A2P05997 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC25.44■■□□□ 1.66
COL5A2P05997 AC009078.2-202ENST00000463353 338 ntBASIC25.44■■□□□ 1.66
COL5A2P05997 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC25.44■■□□□ 1.66
COL5A2P05997 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC25.44■■□□□ 1.66
COL5A2P05997 AL031008.1-201ENST00000619963 541 ntBASIC25.44■■□□□ 1.66
COL5A2P05997 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
COL5A2P05997 AC009237.14-201ENST00000609975 1594 ntBASIC25.44■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms