Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
VTNP04004 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
VTNP04004 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.2■□□□□ 0.98
VTNP04004 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VTNP04004 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
VTNP04004 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
VTNP04004 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC21.19■□□□□ 0.98
VTNP04004 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
VTNP04004 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC21.19■□□□□ 0.98
VTNP04004 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VTNP04004 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VTNP04004 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.19■□□□□ 0.98
VTNP04004 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VTNP04004 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VTNP04004 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC21.19■□□□□ 0.98
VTNP04004 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
VTNP04004 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VTNP04004 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
VTNP04004 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.19■□□□□ 0.98
VTNP04004 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
VTNP04004 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.18■□□□□ 0.98
VTNP04004 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VTNP04004 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
VTNP04004 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VTNP04004 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
VTNP04004 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
VTNP04004 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
VTNP04004 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
VTNP04004 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
VTNP04004 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VTNP04004 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
VTNP04004 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC21.18■□□□□ 0.98
VTNP04004 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
VTNP04004 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC21.18■□□□□ 0.98
VTNP04004 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC21.18■□□□□ 0.98
VTNP04004 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
VTNP04004 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
VTNP04004 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.18■□□□□ 0.98
VTNP04004 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
VTNP04004 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.18■□□□□ 0.98
VTNP04004 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
VTNP04004 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
VTNP04004 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.18■□□□□ 0.98
VTNP04004 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
VTNP04004 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC21.18■□□□□ 0.98
VTNP04004 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC21.18■□□□□ 0.98
VTNP04004 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
VTNP04004 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
VTNP04004 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
VTNP04004 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
VTNP04004 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VTNP04004 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VTNP04004 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VTNP04004 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
VTNP04004 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VTNP04004 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
VTNP04004 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
VTNP04004 NME3-204ENST00000563498 920 ntTSL 2 BASIC21.17■□□□□ 0.98
VTNP04004 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC21.17■□□□□ 0.98
VTNP04004 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
VTNP04004 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC21.17■□□□□ 0.98
VTNP04004 ZNF815P-204ENST00000434898 1737 ntBASIC21.17■□□□□ 0.98
VTNP04004 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.17■□□□□ 0.98
VTNP04004 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.17■□□□□ 0.98
VTNP04004 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VTNP04004 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
VTNP04004 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
VTNP04004 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
VTNP04004 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VTNP04004 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VTNP04004 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VTNP04004 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VTNP04004 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VTNP04004 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VTNP04004 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC21.16■□□□□ 0.98
VTNP04004 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC21.16■□□□□ 0.98
VTNP04004 NT5C-211ENST00000582170 653 ntTSL 3 BASIC21.16■□□□□ 0.98
VTNP04004 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VTNP04004 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
VTNP04004 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
VTNP04004 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC21.16■□□□□ 0.98
VTNP04004 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VTNP04004 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
VTNP04004 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VTNP04004 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
VTNP04004 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
VTNP04004 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VTNP04004 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
VTNP04004 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VTNP04004 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
VTNP04004 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
VTNP04004 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.15■□□□□ 0.98
VTNP04004 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VTNP04004 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.15■□□□□ 0.98
VTNP04004 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
VTNP04004 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.15■□□□□ 0.98
VTNP04004 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC21.15■□□□□ 0.98
VTNP04004 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
VTNP04004 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC21.15■□□□□ 0.98
VTNP04004 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms