Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CXCL13O43927 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CXCL13O43927 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CXCL13O43927 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.31■□□□□ 0.36
CXCL13O43927 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
CXCL13O43927 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CXCL13O43927 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.31■□□□□ 0.36
CXCL13O43927 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.31■□□□□ 0.36
CXCL13O43927 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.31■□□□□ 0.36
CXCL13O43927 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.31■□□□□ 0.36
CXCL13O43927 AC011506.1-201ENST00000474329 610 ntBASIC17.31■□□□□ 0.36
CXCL13O43927 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CXCL13O43927 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.31■□□□□ 0.36
CXCL13O43927 AC116562.2-201ENST00000507042 360 ntBASIC17.31■□□□□ 0.36
CXCL13O43927 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.31■□□□□ 0.36
CXCL13O43927 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.31■□□□□ 0.36
CXCL13O43927 MIR6786-201ENST00000616843 113 ntBASIC17.31■□□□□ 0.36
CXCL13O43927 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.31■□□□□ 0.36
CXCL13O43927 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CXCL13O43927 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CXCL13O43927 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.31■□□□□ 0.36
CXCL13O43927 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CXCL13O43927 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CXCL13O43927 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CXCL13O43927 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CXCL13O43927 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.3■□□□□ 0.36
CXCL13O43927 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.3■□□□□ 0.36
CXCL13O43927 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.3■□□□□ 0.36
CXCL13O43927 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CXCL13O43927 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.3■□□□□ 0.36
CXCL13O43927 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CXCL13O43927 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CXCL13O43927 Z85996.1-201ENST00000494644 937 ntBASIC17.3■□□□□ 0.36
CXCL13O43927 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CXCL13O43927 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
CXCL13O43927 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.3■□□□□ 0.36
CXCL13O43927 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.3■□□□□ 0.36
CXCL13O43927 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.3■□□□□ 0.36
CXCL13O43927 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.3■□□□□ 0.36
CXCL13O43927 RCC2P6-201ENST00000526625 1557 ntBASIC17.3■□□□□ 0.36
CXCL13O43927 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CXCL13O43927 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CXCL13O43927 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.3■□□□□ 0.36
CXCL13O43927 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CXCL13O43927 FSCN1P1-201ENST00000568912 1481 ntBASIC17.3■□□□□ 0.36
CXCL13O43927 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CXCL13O43927 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CXCL13O43927 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CXCL13O43927 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.3■□□□□ 0.36
CXCL13O43927 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CXCL13O43927 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CXCL13O43927 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CXCL13O43927 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CXCL13O43927 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.29■□□□□ 0.36
CXCL13O43927 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.29■□□□□ 0.36
CXCL13O43927 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CXCL13O43927 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CXCL13O43927 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CXCL13O43927 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CXCL13O43927 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CXCL13O43927 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
CXCL13O43927 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
CXCL13O43927 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CXCL13O43927 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CXCL13O43927 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.29■□□□□ 0.36
CXCL13O43927 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CXCL13O43927 MESTP1-201ENST00000404287 994 ntBASIC17.29■□□□□ 0.36
CXCL13O43927 B3GAT3P1-201ENST00000471720 806 ntBASIC17.29■□□□□ 0.36
CXCL13O43927 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.29■□□□□ 0.36
CXCL13O43927 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.29■□□□□ 0.36
CXCL13O43927 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.29■□□□□ 0.36
CXCL13O43927 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CXCL13O43927 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.29■□□□□ 0.36
CXCL13O43927 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CXCL13O43927 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.29■□□□□ 0.36
CXCL13O43927 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.29■□□□□ 0.36
CXCL13O43927 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CXCL13O43927 AC104417.2-201ENST00000562989 1793 ntBASIC17.29■□□□□ 0.36
CXCL13O43927 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CXCL13O43927 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CXCL13O43927 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CXCL13O43927 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CXCL13O43927 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CXCL13O43927 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CXCL13O43927 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CXCL13O43927 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CXCL13O43927 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CXCL13O43927 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
CXCL13O43927 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CXCL13O43927 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CXCL13O43927 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CXCL13O43927 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.28■□□□□ 0.36
CXCL13O43927 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CXCL13O43927 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CXCL13O43927 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CXCL13O43927 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CXCL13O43927 AC004951.3-201ENST00000418645 1148 ntBASIC17.28■□□□□ 0.36
CXCL13O43927 RBM17P1-201ENST00000453646 1190 ntBASIC17.28■□□□□ 0.36
CXCL13O43927 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.28■□□□□ 0.36
CXCL13O43927 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms