Protein–RNA interactions for Protein: O43246

SLC7A4, Cationic amino acid transporter 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC7A4O43246 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SLC7A4O43246 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC7A4O43246 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC7A4O43246 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC7A4O43246 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.65■□□□□ 0.74
SLC7A4O43246 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.65■□□□□ 0.74
SLC7A4O43246 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
SLC7A4O43246 AC093484.2-201ENST00000580996 2166 ntBASIC19.64■□□□□ 0.74
SLC7A4O43246 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.74
SLC7A4O43246 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC7A4O43246 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC7A4O43246 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC7A4O43246 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.64■□□□□ 0.73
SLC7A4O43246 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.64■□□□□ 0.73
SLC7A4O43246 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC7A4O43246 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.64■□□□□ 0.73
SLC7A4O43246 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC7A4O43246 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC7A4O43246 AC079598.2-202ENST00000546624 1451 ntBASIC19.64■□□□□ 0.73
SLC7A4O43246 FSCN1P1-201ENST00000568912 1481 ntBASIC19.64■□□□□ 0.73
SLC7A4O43246 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC7A4O43246 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SLC7A4O43246 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SLC7A4O43246 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC7A4O43246 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SLC7A4O43246 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SLC7A4O43246 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SLC7A4O43246 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SLC7A4O43246 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC7A4O43246 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SLC7A4O43246 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.63■□□□□ 0.73
SLC7A4O43246 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SLC7A4O43246 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.63■□□□□ 0.73
SLC7A4O43246 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SLC7A4O43246 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SLC7A4O43246 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SLC7A4O43246 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.63■□□□□ 0.73
SLC7A4O43246 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.63■□□□□ 0.73
SLC7A4O43246 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.63■□□□□ 0.73
SLC7A4O43246 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
SLC7A4O43246 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.63■□□□□ 0.73
SLC7A4O43246 AP000525.1-201ENST00000608286 694 ntBASIC19.63■□□□□ 0.73
SLC7A4O43246 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.63■□□□□ 0.73
SLC7A4O43246 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.63■□□□□ 0.73
SLC7A4O43246 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC7A4O43246 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.63■□□□□ 0.73
SLC7A4O43246 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC7A4O43246 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SLC7A4O43246 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
SLC7A4O43246 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC7A4O43246 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC7A4O43246 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC7A4O43246 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC7A4O43246 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SLC7A4O43246 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC7A4O43246 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC7A4O43246 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC7A4O43246 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC7A4O43246 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SLC7A4O43246 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SLC7A4O43246 FITM1-202ENST00000559294 800 ntBASIC19.62■□□□□ 0.73
SLC7A4O43246 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.62■□□□□ 0.73
SLC7A4O43246 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.62■□□□□ 0.73
SLC7A4O43246 AC131212.4-201ENST00000623606 975 ntBASIC19.62■□□□□ 0.73
SLC7A4O43246 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.62■□□□□ 0.73
SLC7A4O43246 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SLC7A4O43246 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.62■□□□□ 0.73
SLC7A4O43246 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC7A4O43246 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC7A4O43246 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC7A4O43246 AC005332.7-201ENST00000614046 2005 ntBASIC19.61■□□□□ 0.73
SLC7A4O43246 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.61■□□□□ 0.73
SLC7A4O43246 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC7A4O43246 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SLC7A4O43246 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SLC7A4O43246 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.61■□□□□ 0.73
SLC7A4O43246 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.61■□□□□ 0.73
SLC7A4O43246 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.61■□□□□ 0.73
SLC7A4O43246 DGCR10-201ENST00000609839 495 ntBASIC19.61■□□□□ 0.73
SLC7A4O43246 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC7A4O43246 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC7A4O43246 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC7A4O43246 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
SLC7A4O43246 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC7A4O43246 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
SLC7A4O43246 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC7A4O43246 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC7A4O43246 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC7A4O43246 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SLC7A4O43246 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC7A4O43246 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SLC7A4O43246 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.6■□□□□ 0.73
SLC7A4O43246 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC7A4O43246 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC7A4O43246 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC7A4O43246 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC7A4O43246 MIR1238-201ENST00000408483 83 ntBASIC19.6■□□□□ 0.73
SLC7A4O43246 AC004980.1-204ENST00000429707 299 ntBASIC19.6■□□□□ 0.73
SLC7A4O43246 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.6■□□□□ 0.73
SLC7A4O43246 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms