Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.43■□□□□ 0.54
PCDH17O14917 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH17O14917 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH17O14917 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH17O14917 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
PCDH17O14917 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH17O14917 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH17O14917 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.43■□□□□ 0.54
PCDH17O14917 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.43■□□□□ 0.54
PCDH17O14917 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
PCDH17O14917 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH17O14917 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH17O14917 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.43■□□□□ 0.54
PCDH17O14917 KSR1P1-201ENST00000446298 240 ntBASIC18.43■□□□□ 0.54
PCDH17O14917 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.43■□□□□ 0.54
PCDH17O14917 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.43■□□□□ 0.54
PCDH17O14917 REXO1L12P-201ENST00000622156 912 ntBASIC18.43■□□□□ 0.54
PCDH17O14917 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
PCDH17O14917 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
PCDH17O14917 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDH17O14917 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH17O14917 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH17O14917 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH17O14917 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH17O14917 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH17O14917 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH17O14917 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH17O14917 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
PCDH17O14917 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.42■□□□□ 0.54
PCDH17O14917 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH17O14917 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH17O14917 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PCDH17O14917 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.42■□□□□ 0.54
PCDH17O14917 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH17O14917 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH17O14917 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH17O14917 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PCDH17O14917 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.42■□□□□ 0.54
PCDH17O14917 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.42■□□□□ 0.54
PCDH17O14917 ECEL1P3-201ENST00000427961 737 ntBASIC18.42■□□□□ 0.54
PCDH17O14917 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH17O14917 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH17O14917 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH17O14917 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH17O14917 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH17O14917 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.42■□□□□ 0.54
PCDH17O14917 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.42■□□□□ 0.54
PCDH17O14917 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH17O14917 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PCDH17O14917 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH17O14917 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH17O14917 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH17O14917 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.41■□□□□ 0.54
PCDH17O14917 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH17O14917 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
PCDH17O14917 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH17O14917 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.41■□□□□ 0.54
PCDH17O14917 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PCDH17O14917 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.41■□□□□ 0.54
PCDH17O14917 NIFKP9-201ENST00000419265 221 ntBASIC18.41■□□□□ 0.54
PCDH17O14917 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.41■□□□□ 0.54
PCDH17O14917 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH17O14917 KRT18P16-201ENST00000510337 1294 ntBASIC18.41■□□□□ 0.54
PCDH17O14917 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.41■□□□□ 0.54
PCDH17O14917 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.41■□□□□ 0.54
PCDH17O14917 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
PCDH17O14917 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PCDH17O14917 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDH17O14917 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDH17O14917 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDH17O14917 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.41■□□□□ 0.54
PCDH17O14917 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH17O14917 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH17O14917 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
PCDH17O14917 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH17O14917 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH17O14917 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH17O14917 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH17O14917 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PCDH17O14917 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH17O14917 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.4■□□□□ 0.54
PCDH17O14917 AP001271.2-201ENST00000624018 1556 ntBASIC18.4■□□□□ 0.54
PCDH17O14917 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH17O14917 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH17O14917 AC211429.1-201ENST00000415277 523 ntBASIC18.4■□□□□ 0.54
PCDH17O14917 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.4■□□□□ 0.54
PCDH17O14917 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH17O14917 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH17O14917 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.4■□□□□ 0.54
PCDH17O14917 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
PCDH17O14917 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDH17O14917 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDH17O14917 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDH17O14917 C1QL1P1-201ENST00000568105 661 ntBASIC18.4■□□□□ 0.54
PCDH17O14917 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
PCDH17O14917 CD177P1-201ENST00000606252 935 ntBASIC18.4■□□□□ 0.54
PCDH17O14917 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.4■□□□□ 0.54
PCDH17O14917 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH17O14917 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH17O14917 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms