Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.83■□□□□ 0.61
E2F3O00716 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.83■□□□□ 0.61
E2F3O00716 AL049812.1-201ENST00000432563 2267 ntBASIC18.83■□□□□ 0.61
E2F3O00716 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
E2F3O00716 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
E2F3O00716 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
E2F3O00716 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.83■□□□□ 0.6
E2F3O00716 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.83■□□□□ 0.6
E2F3O00716 AC008550.1-201ENST00000511500 884 ntBASIC18.83■□□□□ 0.6
E2F3O00716 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.83■□□□□ 0.6
E2F3O00716 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.83■□□□□ 0.6
E2F3O00716 AC008403.3-201ENST00000598924 454 ntBASIC18.83■□□□□ 0.6
E2F3O00716 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.83■□□□□ 0.6
E2F3O00716 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
E2F3O00716 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.83■□□□□ 0.6
E2F3O00716 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
E2F3O00716 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
E2F3O00716 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
E2F3O00716 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
E2F3O00716 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
E2F3O00716 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
E2F3O00716 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.82■□□□□ 0.6
E2F3O00716 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
E2F3O00716 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.82■□□□□ 0.6
E2F3O00716 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.82■□□□□ 0.6
E2F3O00716 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
E2F3O00716 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
E2F3O00716 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
E2F3O00716 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
E2F3O00716 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.82■□□□□ 0.6
E2F3O00716 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
E2F3O00716 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
E2F3O00716 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
E2F3O00716 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
E2F3O00716 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
E2F3O00716 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
E2F3O00716 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.82■□□□□ 0.6
E2F3O00716 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.82■□□□□ 0.6
E2F3O00716 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
E2F3O00716 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
E2F3O00716 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
E2F3O00716 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
E2F3O00716 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
E2F3O00716 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
E2F3O00716 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
E2F3O00716 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
E2F3O00716 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
E2F3O00716 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.81■□□□□ 0.6
E2F3O00716 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
E2F3O00716 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
E2F3O00716 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
E2F3O00716 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
E2F3O00716 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.81■□□□□ 0.6
E2F3O00716 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
E2F3O00716 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
E2F3O00716 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
E2F3O00716 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.81■□□□□ 0.6
E2F3O00716 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
E2F3O00716 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.81■□□□□ 0.6
E2F3O00716 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
E2F3O00716 AL359736.2-201ENST00000621992 437 ntBASIC18.81■□□□□ 0.6
E2F3O00716 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.81■□□□□ 0.6
E2F3O00716 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
E2F3O00716 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
E2F3O00716 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
E2F3O00716 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.81■□□□□ 0.6
E2F3O00716 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
E2F3O00716 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
E2F3O00716 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
E2F3O00716 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
E2F3O00716 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
E2F3O00716 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
E2F3O00716 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.81■□□□□ 0.6
E2F3O00716 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
E2F3O00716 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
E2F3O00716 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
E2F3O00716 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
E2F3O00716 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
E2F3O00716 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
E2F3O00716 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.8■□□□□ 0.6
E2F3O00716 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
E2F3O00716 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
E2F3O00716 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
E2F3O00716 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.8■□□□□ 0.6
E2F3O00716 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.8■□□□□ 0.6
E2F3O00716 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
E2F3O00716 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.8■□□□□ 0.6
E2F3O00716 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.8■□□□□ 0.6
E2F3O00716 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
E2F3O00716 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
E2F3O00716 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
E2F3O00716 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
E2F3O00716 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
E2F3O00716 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
E2F3O00716 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
E2F3O00716 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
E2F3O00716 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
E2F3O00716 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.8■□□□□ 0.6
E2F3O00716 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
E2F3O00716 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms