Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.4■□□□□ 0.86
CLDN5O00501 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLDN5O00501 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CLDN5O00501 ECEL1P3-201ENST00000427961 737 ntBASIC20.4■□□□□ 0.86
CLDN5O00501 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLDN5O00501 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
CLDN5O00501 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CLDN5O00501 AC097488.1-201ENST00000507834 756 ntBASIC20.4■□□□□ 0.86
CLDN5O00501 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.4■□□□□ 0.86
CLDN5O00501 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.4■□□□□ 0.86
CLDN5O00501 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CLDN5O00501 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.4■□□□□ 0.86
CLDN5O00501 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CLDN5O00501 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLDN5O00501 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.4■□□□□ 0.86
CLDN5O00501 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.4■□□□□ 0.86
CLDN5O00501 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
CLDN5O00501 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.4■□□□□ 0.86
CLDN5O00501 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.4■□□□□ 0.86
CLDN5O00501 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.39■□□□□ 0.86
CLDN5O00501 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CLDN5O00501 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CLDN5O00501 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
CLDN5O00501 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
CLDN5O00501 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CLDN5O00501 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
CLDN5O00501 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CLDN5O00501 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.39■□□□□ 0.86
CLDN5O00501 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLDN5O00501 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.39■□□□□ 0.85
CLDN5O00501 CYP2D8P-201ENST00000433633 1490 ntBASIC20.39■□□□□ 0.85
CLDN5O00501 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
CLDN5O00501 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLDN5O00501 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLDN5O00501 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.39■□□□□ 0.85
CLDN5O00501 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.39■□□□□ 0.85
CLDN5O00501 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.39■□□□□ 0.85
CLDN5O00501 SLC25A1P4-201ENST00000567977 778 ntBASIC20.39■□□□□ 0.85
CLDN5O00501 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.39■□□□□ 0.85
CLDN5O00501 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.39■□□□□ 0.85
CLDN5O00501 AP000692.2-201ENST00000608391 879 ntBASIC20.39■□□□□ 0.85
CLDN5O00501 AC133561.5-201ENST00000635547 218 ntBASIC20.39■□□□□ 0.85
CLDN5O00501 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.39■□□□□ 0.85
CLDN5O00501 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.39■□□□□ 0.85
CLDN5O00501 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLDN5O00501 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLDN5O00501 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CLDN5O00501 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLDN5O00501 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.38■□□□□ 0.85
CLDN5O00501 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN5O00501 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.38■□□□□ 0.85
CLDN5O00501 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.38■□□□□ 0.85
CLDN5O00501 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN5O00501 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.38■□□□□ 0.85
CLDN5O00501 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CLDN5O00501 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN5O00501 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN5O00501 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN5O00501 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
CLDN5O00501 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.38■□□□□ 0.85
CLDN5O00501 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN5O00501 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN5O00501 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN5O00501 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.38■□□□□ 0.85
CLDN5O00501 CRYGFP-201ENST00000418459 633 ntBASIC20.38■□□□□ 0.85
CLDN5O00501 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN5O00501 FAM207BP-201ENST00000447172 505 ntBASIC20.38■□□□□ 0.85
CLDN5O00501 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN5O00501 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.38■□□□□ 0.85
CLDN5O00501 FITM1-202ENST00000559294 800 ntBASIC20.38■□□□□ 0.85
CLDN5O00501 Z82202.1-201ENST00000623446 1880 ntBASIC20.38■□□□□ 0.85
CLDN5O00501 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN5O00501 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN5O00501 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN5O00501 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN5O00501 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN5O00501 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN5O00501 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.38■□□□□ 0.85
CLDN5O00501 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN5O00501 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN5O00501 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN5O00501 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN5O00501 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN5O00501 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.37■□□□□ 0.85
CLDN5O00501 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN5O00501 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.37■□□□□ 0.85
CLDN5O00501 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN5O00501 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.37■□□□□ 0.85
CLDN5O00501 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN5O00501 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN5O00501 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CLDN5O00501 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN5O00501 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN5O00501 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN5O00501 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.37■□□□□ 0.85
CLDN5O00501 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.37■□□□□ 0.85
CLDN5O00501 DGCR10-201ENST00000609839 495 ntBASIC20.37■□□□□ 0.85
CLDN5O00501 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
CLDN5O00501 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CLDN5O00501 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms