Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRRC53A6NM62 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRRC53A6NM62 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.81■□□□□ 0.92
LRRC53A6NM62 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LRRC53A6NM62 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRRC53A6NM62 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.81■□□□□ 0.92
LRRC53A6NM62 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
LRRC53A6NM62 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRRC53A6NM62 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.81■□□□□ 0.92
LRRC53A6NM62 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.81■□□□□ 0.92
LRRC53A6NM62 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.81■□□□□ 0.92
LRRC53A6NM62 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
LRRC53A6NM62 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRRC53A6NM62 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRRC53A6NM62 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
LRRC53A6NM62 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRRC53A6NM62 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.81■□□□□ 0.92
LRRC53A6NM62 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRRC53A6NM62 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRRC53A6NM62 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
LRRC53A6NM62 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRRC53A6NM62 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LRRC53A6NM62 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
LRRC53A6NM62 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LRRC53A6NM62 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRRC53A6NM62 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LRRC53A6NM62 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.8■□□□□ 0.92
LRRC53A6NM62 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.8■□□□□ 0.92
LRRC53A6NM62 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LRRC53A6NM62 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.8■□□□□ 0.92
LRRC53A6NM62 AC120498.8-201ENST00000614275 531 ntBASIC20.8■□□□□ 0.92
LRRC53A6NM62 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRRC53A6NM62 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LRRC53A6NM62 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRRC53A6NM62 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRRC53A6NM62 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRRC53A6NM62 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRRC53A6NM62 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
LRRC53A6NM62 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRRC53A6NM62 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LRRC53A6NM62 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.8■□□□□ 0.92
LRRC53A6NM62 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
LRRC53A6NM62 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRRC53A6NM62 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
LRRC53A6NM62 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
LRRC53A6NM62 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRRC53A6NM62 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRRC53A6NM62 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LRRC53A6NM62 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.79■□□□□ 0.92
LRRC53A6NM62 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.79■□□□□ 0.92
LRRC53A6NM62 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
LRRC53A6NM62 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.79■□□□□ 0.92
LRRC53A6NM62 KRT18P16-201ENST00000510337 1294 ntBASIC20.79■□□□□ 0.92
LRRC53A6NM62 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.79■□□□□ 0.92
LRRC53A6NM62 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRRC53A6NM62 SOX15-203ENST00000570788 1093 ntBASIC20.79■□□□□ 0.92
LRRC53A6NM62 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
LRRC53A6NM62 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.79■□□□□ 0.92
LRRC53A6NM62 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.79■□□□□ 0.92
LRRC53A6NM62 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRRC53A6NM62 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.79■□□□□ 0.92
LRRC53A6NM62 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRRC53A6NM62 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRRC53A6NM62 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.79■□□□□ 0.92
LRRC53A6NM62 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRRC53A6NM62 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.79■□□□□ 0.92
LRRC53A6NM62 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRRC53A6NM62 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LRRC53A6NM62 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.79■□□□□ 0.92
LRRC53A6NM62 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRRC53A6NM62 IRX1P1-201ENST00000438849 1838 ntBASIC20.78■□□□□ 0.92
LRRC53A6NM62 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.78■□□□□ 0.92
LRRC53A6NM62 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.78■□□□□ 0.92
LRRC53A6NM62 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRRC53A6NM62 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRRC53A6NM62 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRRC53A6NM62 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.78■□□□□ 0.92
LRRC53A6NM62 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.78■□□□□ 0.92
LRRC53A6NM62 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
LRRC53A6NM62 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.78■□□□□ 0.92
LRRC53A6NM62 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.78■□□□□ 0.92
LRRC53A6NM62 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
LRRC53A6NM62 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.78■□□□□ 0.92
LRRC53A6NM62 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRRC53A6NM62 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.78■□□□□ 0.92
LRRC53A6NM62 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LRRC53A6NM62 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRRC53A6NM62 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.77■□□□□ 0.92
LRRC53A6NM62 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.77■□□□□ 0.92
LRRC53A6NM62 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRRC53A6NM62 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.77■□□□□ 0.92
LRRC53A6NM62 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRRC53A6NM62 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRRC53A6NM62 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRRC53A6NM62 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
LRRC53A6NM62 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
LRRC53A6NM62 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.77■□□□□ 0.92
LRRC53A6NM62 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.77■□□□□ 0.92
LRRC53A6NM62 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.77■□□□□ 0.92
LRRC53A6NM62 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms