Protein–RNA interactions for Protein: A6NHL2

TUBAL3, Tubulin alpha chain-like 3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBAL3A6NHL2 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TUBAL3A6NHL2 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TUBAL3A6NHL2 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
TUBAL3A6NHL2 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TUBAL3A6NHL2 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
TUBAL3A6NHL2 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TUBAL3A6NHL2 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
TUBAL3A6NHL2 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TUBAL3A6NHL2 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TUBAL3A6NHL2 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.34■□□□□ 0.37
TUBAL3A6NHL2 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.34■□□□□ 0.37
TUBAL3A6NHL2 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.34■□□□□ 0.37
TUBAL3A6NHL2 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.34■□□□□ 0.37
TUBAL3A6NHL2 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.34■□□□□ 0.37
TUBAL3A6NHL2 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.34■□□□□ 0.37
TUBAL3A6NHL2 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.34■□□□□ 0.37
TUBAL3A6NHL2 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TUBAL3A6NHL2 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.34■□□□□ 0.37
TUBAL3A6NHL2 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
TUBAL3A6NHL2 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.34■□□□□ 0.37
TUBAL3A6NHL2 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TUBAL3A6NHL2 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TUBAL3A6NHL2 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.33■□□□□ 0.37
TUBAL3A6NHL2 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TUBAL3A6NHL2 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
TUBAL3A6NHL2 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TUBAL3A6NHL2 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TUBAL3A6NHL2 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.33■□□□□ 0.37
TUBAL3A6NHL2 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TUBAL3A6NHL2 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TUBAL3A6NHL2 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
TUBAL3A6NHL2 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.33■□□□□ 0.36
TUBAL3A6NHL2 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
TUBAL3A6NHL2 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.33■□□□□ 0.36
TUBAL3A6NHL2 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TUBAL3A6NHL2 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TUBAL3A6NHL2 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.33■□□□□ 0.36
TUBAL3A6NHL2 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TUBAL3A6NHL2 RBM17P1-201ENST00000453646 1190 ntBASIC17.33■□□□□ 0.36
TUBAL3A6NHL2 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
TUBAL3A6NHL2 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.33■□□□□ 0.36
TUBAL3A6NHL2 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.33■□□□□ 0.36
TUBAL3A6NHL2 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.33■□□□□ 0.36
TUBAL3A6NHL2 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.33■□□□□ 0.36
TUBAL3A6NHL2 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.33■□□□□ 0.36
TUBAL3A6NHL2 CR392000.1-201ENST00000624770 1228 ntBASIC17.33■□□□□ 0.36
TUBAL3A6NHL2 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.33■□□□□ 0.36
TUBAL3A6NHL2 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TUBAL3A6NHL2 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TUBAL3A6NHL2 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TUBAL3A6NHL2 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TUBAL3A6NHL2 PTBP1P-201ENST00000554374 1601 ntBASIC17.32■□□□□ 0.36
TUBAL3A6NHL2 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TUBAL3A6NHL2 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TUBAL3A6NHL2 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TUBAL3A6NHL2 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TUBAL3A6NHL2 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TUBAL3A6NHL2 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.32■□□□□ 0.36
TUBAL3A6NHL2 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TUBAL3A6NHL2 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.32■□□□□ 0.36
TUBAL3A6NHL2 KSR1P1-201ENST00000446298 240 ntBASIC17.32■□□□□ 0.36
TUBAL3A6NHL2 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.32■□□□□ 0.36
TUBAL3A6NHL2 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TUBAL3A6NHL2 REXO1L10P-201ENST00000615707 1290 ntBASIC17.32■□□□□ 0.36
TUBAL3A6NHL2 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TUBAL3A6NHL2 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.32■□□□□ 0.36
TUBAL3A6NHL2 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.32■□□□□ 0.36
TUBAL3A6NHL2 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TUBAL3A6NHL2 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TUBAL3A6NHL2 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.32■□□□□ 0.36
TUBAL3A6NHL2 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TUBAL3A6NHL2 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.32■□□□□ 0.36
TUBAL3A6NHL2 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TUBAL3A6NHL2 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TUBAL3A6NHL2 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TUBAL3A6NHL2 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TUBAL3A6NHL2 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.31■□□□□ 0.36
TUBAL3A6NHL2 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TUBAL3A6NHL2 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TUBAL3A6NHL2 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.31■□□□□ 0.36
TUBAL3A6NHL2 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TUBAL3A6NHL2 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.31■□□□□ 0.36
TUBAL3A6NHL2 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TUBAL3A6NHL2 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.31■□□□□ 0.36
TUBAL3A6NHL2 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.31■□□□□ 0.36
TUBAL3A6NHL2 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.31■□□□□ 0.36
TUBAL3A6NHL2 AC145285.6-201ENST00000604632 637 ntBASIC17.31■□□□□ 0.36
TUBAL3A6NHL2 AP000525.1-201ENST00000608286 694 ntBASIC17.31■□□□□ 0.36
TUBAL3A6NHL2 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TUBAL3A6NHL2 MIR6786-201ENST00000616843 113 ntBASIC17.31■□□□□ 0.36
TUBAL3A6NHL2 AC005363.2-201ENST00000618631 242 ntBASIC17.31■□□□□ 0.36
TUBAL3A6NHL2 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.31■□□□□ 0.36
TUBAL3A6NHL2 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.31■□□□□ 0.36
TUBAL3A6NHL2 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.31■□□□□ 0.36
TUBAL3A6NHL2 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TUBAL3A6NHL2 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.31■□□□□ 0.36
TUBAL3A6NHL2 KRT8P17-201ENST00000453110 1448 ntBASIC17.3■□□□□ 0.36
TUBAL3A6NHL2 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TUBAL3A6NHL2 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TUBAL3A6NHL2 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms