Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 AC008764.6-201ENST00000595909 2069 ntBASIC15.24■□□□□ 0.03
RBFOX3A6NFN3 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RBFOX3A6NFN3 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC15.24■□□□□ 0.03
RBFOX3A6NFN3 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RBFOX3A6NFN3 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
RBFOX3A6NFN3 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RBFOX3A6NFN3 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RBFOX3A6NFN3 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RBFOX3A6NFN3 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
RBFOX3A6NFN3 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC15.24■□□□□ 0.03
RBFOX3A6NFN3 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
RBFOX3A6NFN3 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RBFOX3A6NFN3 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RBFOX3A6NFN3 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RBFOX3A6NFN3 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RBFOX3A6NFN3 FAM21FP-204ENST00000608637 956 ntBASIC15.24■□□□□ 0.03
RBFOX3A6NFN3 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RBFOX3A6NFN3 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RBFOX3A6NFN3 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RBFOX3A6NFN3 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RBFOX3A6NFN3 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RBFOX3A6NFN3 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC15.24■□□□□ 0.03
RBFOX3A6NFN3 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RBFOX3A6NFN3 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RBFOX3A6NFN3 ESPNP-201ENST00000270691 2015 ntBASIC15.24■□□□□ 0.03
RBFOX3A6NFN3 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC15.24■□□□□ 0.03
RBFOX3A6NFN3 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RBFOX3A6NFN3 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RBFOX3A6NFN3 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RBFOX3A6NFN3 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RBFOX3A6NFN3 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RBFOX3A6NFN3 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RBFOX3A6NFN3 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RBFOX3A6NFN3 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RBFOX3A6NFN3 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
RBFOX3A6NFN3 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RBFOX3A6NFN3 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.23■□□□□ 0.03
RBFOX3A6NFN3 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RBFOX3A6NFN3 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RBFOX3A6NFN3 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RBFOX3A6NFN3 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RBFOX3A6NFN3 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RBFOX3A6NFN3 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RBFOX3A6NFN3 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RBFOX3A6NFN3 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC15.23■□□□□ 0.03
RBFOX3A6NFN3 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC15.23■□□□□ 0.03
RBFOX3A6NFN3 KRT16P3-201ENST00000439127 1283 ntBASIC15.23■□□□□ 0.03
RBFOX3A6NFN3 SRD5A1P1-201ENST00000442297 786 ntBASIC15.23■□□□□ 0.03
RBFOX3A6NFN3 CREM-229ENST00000474362 1030 ntTSL 2 BASIC15.23■□□□□ 0.03
RBFOX3A6NFN3 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC15.23■□□□□ 0.03
RBFOX3A6NFN3 AC133561.4-201ENST00000566112 224 ntBASIC15.23■□□□□ 0.03
RBFOX3A6NFN3 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RBFOX3A6NFN3 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RBFOX3A6NFN3 KRT16P6-202ENST00000425692 1426 ntBASIC15.23■□□□□ 0.03
RBFOX3A6NFN3 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RBFOX3A6NFN3 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.23■□□□□ 0.03
RBFOX3A6NFN3 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RBFOX3A6NFN3 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RBFOX3A6NFN3 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RBFOX3A6NFN3 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RBFOX3A6NFN3 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC15.23■□□□□ 0.03
RBFOX3A6NFN3 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RBFOX3A6NFN3 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RBFOX3A6NFN3 AC124067.4-201ENST00000519691 2379 ntBASIC15.22■□□□□ 0.03
RBFOX3A6NFN3 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
RBFOX3A6NFN3 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RBFOX3A6NFN3 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RBFOX3A6NFN3 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RBFOX3A6NFN3 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC15.22■□□□□ 0.03
RBFOX3A6NFN3 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RBFOX3A6NFN3 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC15.22■□□□□ 0.03
RBFOX3A6NFN3 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RBFOX3A6NFN3 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC15.22■□□□□ 0.03
RBFOX3A6NFN3 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RBFOX3A6NFN3 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RBFOX3A6NFN3 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC15.22■□□□□ 0.03
RBFOX3A6NFN3 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC15.22■□□□□ 0.03
RBFOX3A6NFN3 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RBFOX3A6NFN3 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC15.22■□□□□ 0.03
RBFOX3A6NFN3 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC15.22■□□□□ 0.03
RBFOX3A6NFN3 KRT16P2-201ENST00000414673 1423 ntBASIC15.22■□□□□ 0.03
RBFOX3A6NFN3 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RBFOX3A6NFN3 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RBFOX3A6NFN3 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC15.22■□□□□ 0.03
RBFOX3A6NFN3 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RBFOX3A6NFN3 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.22■□□□□ 0.03
RBFOX3A6NFN3 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
RBFOX3A6NFN3 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.22■□□□□ 0.03
RBFOX3A6NFN3 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.22■□□□□ 0.03
RBFOX3A6NFN3 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RBFOX3A6NFN3 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RBFOX3A6NFN3 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RBFOX3A6NFN3 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.22■□□□□ 0.03
RBFOX3A6NFN3 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RBFOX3A6NFN3 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RBFOX3A6NFN3 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RBFOX3A6NFN3 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RBFOX3A6NFN3 TNRC18P3-201ENST00000441896 2691 ntBASIC15.21■□□□□ 0.03
RBFOX3A6NFN3 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.21■□□□□ 0.03
RBFOX3A6NFN3 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms