Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAV12-3A0A0B4J271 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV12-3A0A0B4J271 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV12-3A0A0B4J271 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV12-3A0A0B4J271 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV12-3A0A0B4J271 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAV12-3A0A0B4J271 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAV12-3A0A0B4J271 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV12-3A0A0B4J271 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TRAV12-3A0A0B4J271 MAP2K4P1-201ENST00000438453 1195 ntBASIC14.37□□□□□ -0.11
TRAV12-3A0A0B4J271 REXO2-208ENST00000539754 791 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAV12-3A0A0B4J271 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAV12-3A0A0B4J271 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC14.37□□□□□ -0.11
TRAV12-3A0A0B4J271 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
TRAV12-3A0A0B4J271 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV12-3A0A0B4J271 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV12-3A0A0B4J271 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV12-3A0A0B4J271 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV12-3A0A0B4J271 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV12-3A0A0B4J271 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV12-3A0A0B4J271 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV12-3A0A0B4J271 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAV12-3A0A0B4J271 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC14.37□□□□□ -0.11
TRAV12-3A0A0B4J271 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC14.37□□□□□ -0.11
TRAV12-3A0A0B4J271 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV12-3A0A0B4J271 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV12-3A0A0B4J271 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TRAV12-3A0A0B4J271 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV12-3A0A0B4J271 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV12-3A0A0B4J271 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC14.37□□□□□ -0.11
TRAV12-3A0A0B4J271 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV12-3A0A0B4J271 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAV12-3A0A0B4J271 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC14.37□□□□□ -0.11
TRAV12-3A0A0B4J271 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV12-3A0A0B4J271 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC14.36□□□□□ -0.11
TRAV12-3A0A0B4J271 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV12-3A0A0B4J271 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV12-3A0A0B4J271 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV12-3A0A0B4J271 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
TRAV12-3A0A0B4J271 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV12-3A0A0B4J271 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TRAV12-3A0A0B4J271 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TRAV12-3A0A0B4J271 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV12-3A0A0B4J271 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV12-3A0A0B4J271 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC14.36□□□□□ -0.11
TRAV12-3A0A0B4J271 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
TRAV12-3A0A0B4J271 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV12-3A0A0B4J271 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV12-3A0A0B4J271 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV12-3A0A0B4J271 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV12-3A0A0B4J271 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC14.36□□□□□ -0.11
TRAV12-3A0A0B4J271 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV12-3A0A0B4J271 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC14.36□□□□□ -0.11
TRAV12-3A0A0B4J271 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV12-3A0A0B4J271 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV12-3A0A0B4J271 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV12-3A0A0B4J271 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV12-3A0A0B4J271 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
TRAV12-3A0A0B4J271 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC14.35□□□□□ -0.11
TRAV12-3A0A0B4J271 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV12-3A0A0B4J271 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC14.35□□□□□ -0.11
TRAV12-3A0A0B4J271 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV12-3A0A0B4J271 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC14.35□□□□□ -0.11
TRAV12-3A0A0B4J271 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV12-3A0A0B4J271 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC14.35□□□□□ -0.11
TRAV12-3A0A0B4J271 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV12-3A0A0B4J271 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV12-3A0A0B4J271 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
TRAV12-3A0A0B4J271 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV12-3A0A0B4J271 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC14.35□□□□□ -0.11
TRAV12-3A0A0B4J271 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC14.35□□□□□ -0.11
TRAV12-3A0A0B4J271 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC14.35□□□□□ -0.11
TRAV12-3A0A0B4J271 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV12-3A0A0B4J271 AL138781.1-201ENST00000566567 1274 ntBASIC14.35□□□□□ -0.11
TRAV12-3A0A0B4J271 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC14.35□□□□□ -0.11
TRAV12-3A0A0B4J271 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC14.35□□□□□ -0.11
TRAV12-3A0A0B4J271 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC14.35□□□□□ -0.11
TRAV12-3A0A0B4J271 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC14.35□□□□□ -0.11
TRAV12-3A0A0B4J271 AL109923.1-201ENST00000618799 583 ntBASIC14.35□□□□□ -0.11
TRAV12-3A0A0B4J271 HLA-B-256ENST00000639848 1089 ntBASIC14.35□□□□□ -0.11
TRAV12-3A0A0B4J271 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV12-3A0A0B4J271 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV12-3A0A0B4J271 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TRAV12-3A0A0B4J271 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TRAV12-3A0A0B4J271 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC14.35□□□□□ -0.11
TRAV12-3A0A0B4J271 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
TRAV12-3A0A0B4J271 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV12-3A0A0B4J271 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC14.35□□□□□ -0.11
TRAV12-3A0A0B4J271 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TRAV12-3A0A0B4J271 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV12-3A0A0B4J271 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV12-3A0A0B4J271 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV12-3A0A0B4J271 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV12-3A0A0B4J271 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV12-3A0A0B4J271 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV12-3A0A0B4J271 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV12-3A0A0B4J271 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC14.34□□□□□ -0.11
TRAV12-3A0A0B4J271 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV12-3A0A0B4J271 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV12-3A0A0B4J271 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms