Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 RNU1-33P-201ENST00000364249 162 ntBASIC3.59□□□□□ -1.83
CISHQ9NSE2 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CISHQ9NSE2 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.83
CISHQ9NSE2 RPS3AP25-201ENST00000411660 793 ntBASIC3.59□□□□□ -1.83
CISHQ9NSE2 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CISHQ9NSE2 AC093578.1-201ENST00000415219 368 ntBASIC3.59□□□□□ -1.83
CISHQ9NSE2 RPS26P40-201ENST00000435209 294 ntBASIC3.59□□□□□ -1.83
CISHQ9NSE2 RPL6P5-201ENST00000445678 828 ntBASIC3.59□□□□□ -1.83
CISHQ9NSE2 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.59□□□□□ -1.83
CISHQ9NSE2 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC3.59□□□□□ -1.83
CISHQ9NSE2 PLGLA-201ENST00000465668 449 ntBASIC3.59□□□□□ -1.83
CISHQ9NSE2 AC021205.2-201ENST00000480069 347 ntBASIC3.59□□□□□ -1.83
CISHQ9NSE2 RPL21P13-201ENST00000488305 481 ntBASIC3.59□□□□□ -1.83
CISHQ9NSE2 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.59□□□□□ -1.83
CISHQ9NSE2 RPL7P47-201ENST00000497299 556 ntBASIC3.59□□□□□ -1.83
CISHQ9NSE2 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.59□□□□□ -1.83
CISHQ9NSE2 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.59□□□□□ -1.83
CISHQ9NSE2 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.59□□□□□ -1.83
CISHQ9NSE2 ARL2BPP6-201ENST00000512757 439 ntBASIC3.59□□□□□ -1.83
CISHQ9NSE2 DUXAP2-201ENST00000519198 589 ntBASIC3.59□□□□□ -1.83
CISHQ9NSE2 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.59□□□□□ -1.83
CISHQ9NSE2 AL139174.1-201ENST00000531489 886 ntBASIC3.59□□□□□ -1.83
CISHQ9NSE2 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CISHQ9NSE2 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.59□□□□□ -1.83
CISHQ9NSE2 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC3.59□□□□□ -1.83
CISHQ9NSE2 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC3.59□□□□□ -1.83
CISHQ9NSE2 VN1R81P-201ENST00000602085 372 ntBASIC3.59□□□□□ -1.83
CISHQ9NSE2 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.59□□□□□ -1.83
CISHQ9NSE2 AC004825.2-201ENST00000616634 455 ntBASIC3.59□□□□□ -1.83
CISHQ9NSE2 MIR6075-201ENST00000620782 95 ntBASIC3.59□□□□□ -1.83
CISHQ9NSE2 AC017071.1-201ENST00000564407 2204 ntBASIC3.59□□□□□ -1.84
CISHQ9NSE2 MTCO1P12-201ENST00000414273 1543 ntBASIC3.59□□□□□ -1.84
CISHQ9NSE2 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.59□□□□□ -1.84
CISHQ9NSE2 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.58□□□□□ -1.84
CISHQ9NSE2 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.58□□□□□ -1.84
CISHQ9NSE2 AL133412.1-201ENST00000380194 2992 ntBASIC3.58□□□□□ -1.84
CISHQ9NSE2 AC093311.1-201ENST00000506586 2021 ntBASIC3.58□□□□□ -1.84
CISHQ9NSE2 PRO1804-201ENST00000623780 2050 ntBASIC3.58□□□□□ -1.84
CISHQ9NSE2 AC058791.1-201ENST00000608412 3198 ntBASIC3.58□□□□□ -1.84
CISHQ9NSE2 PWAR6-201ENST00000552334 4618 ntBASIC3.58□□□□□ -1.84
CISHQ9NSE2 RNU6-55P-201ENST00000411092 107 ntBASIC3.58□□□□□ -1.84
CISHQ9NSE2 RNU6-954P-201ENST00000411355 107 ntBASIC3.58□□□□□ -1.84
CISHQ9NSE2 RPS7P15-201ENST00000415804 584 ntBASIC3.58□□□□□ -1.84
CISHQ9NSE2 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.58□□□□□ -1.84
CISHQ9NSE2 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CISHQ9NSE2 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.58□□□□□ -1.84
CISHQ9NSE2 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.58□□□□□ -1.84
CISHQ9NSE2 BMS1P19-201ENST00000433925 393 ntBASIC3.58□□□□□ -1.84
CISHQ9NSE2 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.58□□□□□ -1.84
CISHQ9NSE2 AC105918.1-201ENST00000474399 838 ntBASIC3.58□□□□□ -1.84
CISHQ9NSE2 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.58□□□□□ -1.84
CISHQ9NSE2 OR8X1P-201ENST00000534542 869 ntBASIC3.58□□□□□ -1.84
CISHQ9NSE2 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.58□□□□□ -1.84
CISHQ9NSE2 AC090953.1-201ENST00000604305 1092 ntBASIC3.58□□□□□ -1.84
CISHQ9NSE2 AC019176.2-201ENST00000611579 315 ntBASIC3.58□□□□□ -1.84
CISHQ9NSE2 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CISHQ9NSE2 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
CISHQ9NSE2 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.58□□□□□ -1.84
CISHQ9NSE2 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CISHQ9NSE2 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CISHQ9NSE2 RNA5SP171-201ENST00000391071 115 ntBASIC3.57□□□□□ -1.84
CISHQ9NSE2 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
CISHQ9NSE2 AL389915.1-201ENST00000422463 466 ntBASIC3.57□□□□□ -1.84
CISHQ9NSE2 OR6K4P-201ENST00000423179 955 ntBASIC3.57□□□□□ -1.84
CISHQ9NSE2 AC097713.2-201ENST00000430199 356 ntBASIC3.57□□□□□ -1.84
CISHQ9NSE2 PPIAP17-201ENST00000438507 471 ntBASIC3.57□□□□□ -1.84
CISHQ9NSE2 PRDX3P3-201ENST00000447765 522 ntBASIC3.57□□□□□ -1.84
CISHQ9NSE2 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.57□□□□□ -1.84
CISHQ9NSE2 PNPT1P2-201ENST00000456768 2050 ntBASIC3.57□□□□□ -1.84
CISHQ9NSE2 RPL21P10-201ENST00000463521 490 ntBASIC3.57□□□□□ -1.84
CISHQ9NSE2 AC111000.5-201ENST00000506559 1178 ntBASIC3.57□□□□□ -1.84
CISHQ9NSE2 AC018797.3-201ENST00000513388 1241 ntBASIC3.57□□□□□ -1.84
CISHQ9NSE2 SNORD116-26-201ENST00000516006 96 ntBASIC3.57□□□□□ -1.84
CISHQ9NSE2 RN7SKP116-201ENST00000516902 319 ntBASIC3.57□□□□□ -1.84
CISHQ9NSE2 RN7SKP60-201ENST00000516985 239 ntBASIC3.57□□□□□ -1.84
CISHQ9NSE2 IGLVIV-53-201ENST00000520107 367 ntBASIC3.57□□□□□ -1.84
CISHQ9NSE2 NDUFB9P3-201ENST00000521269 501 ntBASIC3.57□□□□□ -1.84
CISHQ9NSE2 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.57□□□□□ -1.84
CISHQ9NSE2 AP000619.3-201ENST00000535634 1127 ntBASIC3.57□□□□□ -1.84
CISHQ9NSE2 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.57□□□□□ -1.84
CISHQ9NSE2 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.57□□□□□ -1.84
CISHQ9NSE2 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CISHQ9NSE2 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.57□□□□□ -1.84
CISHQ9NSE2 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CISHQ9NSE2 AC134882.1-201ENST00000603738 1676 ntBASIC3.57□□□□□ -1.84
CISHQ9NSE2 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC3.57□□□□□ -1.84
CISHQ9NSE2 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.57□□□□□ -1.84
CISHQ9NSE2 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.57□□□□□ -1.84
CISHQ9NSE2 AL356321.1-201ENST00000621360 228 ntBASIC3.57□□□□□ -1.84
CISHQ9NSE2 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.57□□□□□ -1.84
CISHQ9NSE2 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CISHQ9NSE2 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CISHQ9NSE2 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CISHQ9NSE2 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
CISHQ9NSE2 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC3.56□□□□□ -1.84
CISHQ9NSE2 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
CISHQ9NSE2 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
CISHQ9NSE2 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.56□□□□□ -1.84
CISHQ9NSE2 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.56□□□□□ -1.84
CISHQ9NSE2 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms