Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 MIR141-201ENST00000384975 95 ntBASIC4.18□□□□□ -1.74
SIX2Q9NPC8 HMGN2P8-201ENST00000391458 268 ntBASIC4.18□□□□□ -1.74
SIX2Q9NPC8 ATP5F1P2-201ENST00000398143 760 ntBASIC4.18□□□□□ -1.74
SIX2Q9NPC8 ZNF603P-201ENST00000405613 487 ntBASIC4.18□□□□□ -1.74
SIX2Q9NPC8 AL450992.3-201ENST00000413192 568 ntBASIC4.18□□□□□ -1.74
SIX2Q9NPC8 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.18□□□□□ -1.74
SIX2Q9NPC8 AC246680.2-201ENST00000422106 389 ntBASIC4.18□□□□□ -1.74
SIX2Q9NPC8 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC4.18□□□□□ -1.74
SIX2Q9NPC8 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC4.18□□□□□ -1.74
SIX2Q9NPC8 AC092634.2-201ENST00000428146 1010 ntBASIC4.18□□□□□ -1.74
SIX2Q9NPC8 FTLP19-201ENST00000433300 394 ntBASIC4.18□□□□□ -1.74
SIX2Q9NPC8 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.18□□□□□ -1.74
SIX2Q9NPC8 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.18□□□□□ -1.74
SIX2Q9NPC8 MTND1P31-201ENST00000449206 961 ntBASIC4.18□□□□□ -1.74
SIX2Q9NPC8 ZNF886P-201ENST00000450781 723 ntBASIC4.18□□□□□ -1.74
SIX2Q9NPC8 RPS6P2-201ENST00000454208 705 ntBASIC4.18□□□□□ -1.74
SIX2Q9NPC8 RPL7P48-201ENST00000461513 746 ntBASIC4.18□□□□□ -1.74
SIX2Q9NPC8 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.18□□□□□ -1.74
SIX2Q9NPC8 AC084198.1-201ENST00000477747 402 ntBASIC4.18□□□□□ -1.74
SIX2Q9NPC8 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
SIX2Q9NPC8 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.18□□□□□ -1.74
SIX2Q9NPC8 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC4.18□□□□□ -1.74
SIX2Q9NPC8 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.18□□□□□ -1.74
SIX2Q9NPC8 AC119751.1-201ENST00000513357 765 ntBASIC4.18□□□□□ -1.74
SIX2Q9NPC8 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.18□□□□□ -1.74
SIX2Q9NPC8 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.18□□□□□ -1.74
SIX2Q9NPC8 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.18□□□□□ -1.74
SIX2Q9NPC8 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.18□□□□□ -1.74
SIX2Q9NPC8 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.18□□□□□ -1.74
SIX2Q9NPC8 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.18□□□□□ -1.74
SIX2Q9NPC8 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SIX2Q9NPC8 AC068790.5-201ENST00000602741 355 ntBASIC4.18□□□□□ -1.74
SIX2Q9NPC8 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.18□□□□□ -1.74
SIX2Q9NPC8 Z99289.3-201ENST00000605586 594 ntBASIC4.18□□□□□ -1.74
SIX2Q9NPC8 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SIX2Q9NPC8 AC004908.3-201ENST00000610248 625 ntBASIC4.18□□□□□ -1.74
SIX2Q9NPC8 AL122125.1-201ENST00000616999 600 ntBASIC4.18□□□□□ -1.74
SIX2Q9NPC8 AC123767.1-202ENST00000620407 817 ntBASIC4.18□□□□□ -1.74
SIX2Q9NPC8 AC103858.2-201ENST00000621471 543 ntBASIC4.18□□□□□ -1.74
SIX2Q9NPC8 AL359715.5-201ENST00000623431 443 ntBASIC4.18□□□□□ -1.74
SIX2Q9NPC8 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SIX2Q9NPC8 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SIX2Q9NPC8 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SIX2Q9NPC8 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SIX2Q9NPC8 CASC19-284ENST00000642142 1868 ntBASIC4.18□□□□□ -1.74
SIX2Q9NPC8 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SIX2Q9NPC8 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.17□□□□□ -1.74
SIX2Q9NPC8 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
SIX2Q9NPC8 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
SIX2Q9NPC8 SEC63P2-201ENST00000503863 1939 ntBASIC4.17□□□□□ -1.74
SIX2Q9NPC8 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.17□□□□□ -1.74
SIX2Q9NPC8 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SIX2Q9NPC8 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SIX2Q9NPC8 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
SIX2Q9NPC8 ANKRD36P1-201ENST00000344424 659 ntBASIC4.17□□□□□ -1.74
SIX2Q9NPC8 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
SIX2Q9NPC8 MIR372-201ENST00000362225 67 ntBASIC4.17□□□□□ -1.74
SIX2Q9NPC8 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.17□□□□□ -1.74
SIX2Q9NPC8 RNU1-13P-201ENST00000384499 162 ntBASIC4.17□□□□□ -1.74
SIX2Q9NPC8 SNORA70C-201ENST00000384538 135 ntBASIC4.17□□□□□ -1.74
SIX2Q9NPC8 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.17□□□□□ -1.74
SIX2Q9NPC8 RNU4-22P-201ENST00000411058 166 ntBASIC4.17□□□□□ -1.74
SIX2Q9NPC8 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.17□□□□□ -1.74
SIX2Q9NPC8 RPS7P9-201ENST00000414704 586 ntBASIC4.17□□□□□ -1.74
SIX2Q9NPC8 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SIX2Q9NPC8 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC4.17□□□□□ -1.74
SIX2Q9NPC8 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC4.17□□□□□ -1.74
SIX2Q9NPC8 Z97055.1-201ENST00000419730 712 ntBASIC4.17□□□□□ -1.74
SIX2Q9NPC8 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC4.17□□□□□ -1.74
SIX2Q9NPC8 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.17□□□□□ -1.74
SIX2Q9NPC8 AC022022.1-201ENST00000430304 178 ntBASIC4.17□□□□□ -1.74
SIX2Q9NPC8 CETN4P-201ENST00000432407 469 ntBASIC4.17□□□□□ -1.74
SIX2Q9NPC8 OR4C10P-201ENST00000434991 931 ntBASIC4.17□□□□□ -1.74
SIX2Q9NPC8 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.17□□□□□ -1.74
SIX2Q9NPC8 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.17□□□□□ -1.74
SIX2Q9NPC8 AC092170.1-201ENST00000440211 356 ntBASIC4.17□□□□□ -1.74
SIX2Q9NPC8 AL591719.1-201ENST00000444669 744 ntBASIC4.17□□□□□ -1.74
SIX2Q9NPC8 ARL5AP2-201ENST00000444698 533 ntBASIC4.17□□□□□ -1.74
SIX2Q9NPC8 Z73417.1-201ENST00000447373 778 ntBASIC4.17□□□□□ -1.74
SIX2Q9NPC8 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.17□□□□□ -1.74
SIX2Q9NPC8 SEPT7P3-201ENST00000455017 621 ntBASIC4.17□□□□□ -1.74
SIX2Q9NPC8 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.17□□□□□ -1.74
SIX2Q9NPC8 MTCO2P6-201ENST00000463134 685 ntBASIC4.17□□□□□ -1.74
SIX2Q9NPC8 RPS7P7-201ENST00000463499 571 ntBASIC4.17□□□□□ -1.74
SIX2Q9NPC8 RPS23P7-201ENST00000466210 444 ntBASIC4.17□□□□□ -1.74
SIX2Q9NPC8 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC4.17□□□□□ -1.74
SIX2Q9NPC8 RPS6P4-201ENST00000494693 758 ntBASIC4.17□□□□□ -1.74
SIX2Q9NPC8 AC023050.1-201ENST00000498198 304 ntBASIC4.17□□□□□ -1.74
SIX2Q9NPC8 FTH1P21-201ENST00000512179 511 ntBASIC4.17□□□□□ -1.74
SIX2Q9NPC8 AC108064.1-201ENST00000513791 460 ntBASIC4.17□□□□□ -1.74
SIX2Q9NPC8 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC4.17□□□□□ -1.74
SIX2Q9NPC8 RNA5SP208-201ENST00000516156 78 ntBASIC4.17□□□□□ -1.74
SIX2Q9NPC8 RNU6-352P-201ENST00000516908 107 ntBASIC4.17□□□□□ -1.74
SIX2Q9NPC8 RNA5SP143-201ENST00000516936 115 ntBASIC4.17□□□□□ -1.74
SIX2Q9NPC8 HMGB1P1-201ENST00000522557 636 ntBASIC4.17□□□□□ -1.74
SIX2Q9NPC8 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC4.17□□□□□ -1.74
SIX2Q9NPC8 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.17□□□□□ -1.74
SIX2Q9NPC8 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.17□□□□□ -1.74
SIX2Q9NPC8 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.17□□□□□ -1.74
SIX2Q9NPC8 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms