Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 SYPL1P1-201ENST00000473622 768 ntBASIC4.81□□□□□ -1.64
USP29Q9HBJ7 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
USP29Q9HBJ7 RN7SL459P-201ENST00000481078 302 ntBASIC4.81□□□□□ -1.64
USP29Q9HBJ7 ACTG1P13-201ENST00000486987 1043 ntBASIC4.81□□□□□ -1.64
USP29Q9HBJ7 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
USP29Q9HBJ7 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.81□□□□□ -1.64
USP29Q9HBJ7 AC112198.1-201ENST00000505369 1220 ntBASIC4.81□□□□□ -1.64
USP29Q9HBJ7 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
USP29Q9HBJ7 AC010285.3-201ENST00000511668 676 ntBASIC4.81□□□□□ -1.64
USP29Q9HBJ7 AC109445.1-201ENST00000512356 383 ntBASIC4.81□□□□□ -1.64
USP29Q9HBJ7 RN7SKP276-201ENST00000516242 268 ntBASIC4.81□□□□□ -1.64
USP29Q9HBJ7 RNU6-1225P-201ENST00000516336 65 ntBASIC4.81□□□□□ -1.64
USP29Q9HBJ7 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.81□□□□□ -1.64
USP29Q9HBJ7 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.81□□□□□ -1.64
USP29Q9HBJ7 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.81□□□□□ -1.64
USP29Q9HBJ7 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.81□□□□□ -1.64
USP29Q9HBJ7 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.81□□□□□ -1.64
USP29Q9HBJ7 AC105129.1-201ENST00000560250 297 ntBASIC4.81□□□□□ -1.64
USP29Q9HBJ7 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.81□□□□□ -1.64
USP29Q9HBJ7 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.81□□□□□ -1.64
USP29Q9HBJ7 PSMA6P4-201ENST00000603247 718 ntBASIC4.81□□□□□ -1.64
USP29Q9HBJ7 CLPTM1LP1-201ENST00000604519 484 ntBASIC4.81□□□□□ -1.64
USP29Q9HBJ7 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.81□□□□□ -1.64
USP29Q9HBJ7 AC234782.5-201ENST00000617723 324 ntBASIC4.81□□□□□ -1.64
USP29Q9HBJ7 AC073348.1-201ENST00000623002 331 ntBASIC4.81□□□□□ -1.64
USP29Q9HBJ7 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.81□□□□□ -1.64
USP29Q9HBJ7 AC116618.1-201ENST00000634617 774 ntBASIC4.81□□□□□ -1.64
USP29Q9HBJ7 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
USP29Q9HBJ7 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
USP29Q9HBJ7 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
USP29Q9HBJ7 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.81□□□□□ -1.64
USP29Q9HBJ7 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
USP29Q9HBJ7 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
USP29Q9HBJ7 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.81□□□□□ -1.64
USP29Q9HBJ7 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
USP29Q9HBJ7 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
USP29Q9HBJ7 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
USP29Q9HBJ7 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.81□□□□□ -1.64
USP29Q9HBJ7 AC119744.1-201ENST00000454746 1715 ntBASIC4.8□□□□□ -1.64
USP29Q9HBJ7 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
USP29Q9HBJ7 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC4.8□□□□□ -1.64
USP29Q9HBJ7 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
USP29Q9HBJ7 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
USP29Q9HBJ7 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
USP29Q9HBJ7 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.8□□□□□ -1.64
USP29Q9HBJ7 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.8□□□□□ -1.64
USP29Q9HBJ7 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.8□□□□□ -1.64
USP29Q9HBJ7 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
USP29Q9HBJ7 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.8□□□□□ -1.64
USP29Q9HBJ7 OR4K15-201ENST00000305051 1216 ntBASIC4.8□□□□□ -1.64
USP29Q9HBJ7 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
USP29Q9HBJ7 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
USP29Q9HBJ7 RNA5SP191-201ENST00000362585 102 ntBASIC4.8□□□□□ -1.64
USP29Q9HBJ7 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
USP29Q9HBJ7 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
USP29Q9HBJ7 SNORD116-4-201ENST00000384733 96 ntBASIC4.8□□□□□ -1.64
USP29Q9HBJ7 MIR921-201ENST00000401133 56 ntBASIC4.8□□□□□ -1.64
USP29Q9HBJ7 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC4.8□□□□□ -1.64
USP29Q9HBJ7 RPL6P29-201ENST00000414863 865 ntBASIC4.8□□□□□ -1.64
USP29Q9HBJ7 P2RY10P2-201ENST00000416730 913 ntBASIC4.8□□□□□ -1.64
USP29Q9HBJ7 AC009480.2-201ENST00000422916 432 ntBASIC4.8□□□□□ -1.64
USP29Q9HBJ7 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.8□□□□□ -1.64
USP29Q9HBJ7 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.8□□□□□ -1.64
USP29Q9HBJ7 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.8□□□□□ -1.64
USP29Q9HBJ7 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC4.8□□□□□ -1.64
USP29Q9HBJ7 AL589765.3-201ENST00000446084 462 ntBASIC4.8□□□□□ -1.64
USP29Q9HBJ7 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC4.8□□□□□ -1.64
USP29Q9HBJ7 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC4.8□□□□□ -1.64
USP29Q9HBJ7 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.8□□□□□ -1.64
USP29Q9HBJ7 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.8□□□□□ -1.64
USP29Q9HBJ7 AC092754.2-201ENST00000463506 460 ntBASIC4.8□□□□□ -1.64
USP29Q9HBJ7 RPS4XP18-201ENST00000495480 763 ntBASIC4.8□□□□□ -1.64
USP29Q9HBJ7 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC4.8□□□□□ -1.64
USP29Q9HBJ7 AC147055.4-201ENST00000504399 745 ntBASIC4.8□□□□□ -1.64
USP29Q9HBJ7 RNA5SP446-201ENST00000515955 82 ntBASIC4.8□□□□□ -1.64
USP29Q9HBJ7 RNU6-347P-201ENST00000516658 105 ntBASIC4.8□□□□□ -1.64
USP29Q9HBJ7 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.8□□□□□ -1.64
USP29Q9HBJ7 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC4.8□□□□□ -1.64
USP29Q9HBJ7 COX6B1P6-201ENST00000522347 255 ntBASIC4.8□□□□□ -1.64
USP29Q9HBJ7 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.8□□□□□ -1.64
USP29Q9HBJ7 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.8□□□□□ -1.64
USP29Q9HBJ7 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.8□□□□□ -1.64
USP29Q9HBJ7 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
USP29Q9HBJ7 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC4.8□□□□□ -1.64
USP29Q9HBJ7 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.8□□□□□ -1.64
USP29Q9HBJ7 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.8□□□□□ -1.64
USP29Q9HBJ7 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC4.8□□□□□ -1.64
USP29Q9HBJ7 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.8□□□□□ -1.64
USP29Q9HBJ7 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC4.8□□□□□ -1.64
USP29Q9HBJ7 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.8□□□□□ -1.64
USP29Q9HBJ7 AC068790.4-201ENST00000602474 263 ntBASIC4.8□□□□□ -1.64
USP29Q9HBJ7 AC123786.2-201ENST00000603459 275 ntBASIC4.8□□□□□ -1.64
USP29Q9HBJ7 AC091979.2-201ENST00000607514 214 ntBASIC4.8□□□□□ -1.64
USP29Q9HBJ7 AC004223.4-201ENST00000612426 332 ntBASIC4.8□□□□□ -1.64
USP29Q9HBJ7 AC243654.2-201ENST00000612843 443 ntBASIC4.8□□□□□ -1.64
USP29Q9HBJ7 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
USP29Q9HBJ7 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC4.8□□□□□ -1.64
USP29Q9HBJ7 AC073530.2-201ENST00000623987 261 ntBASIC4.8□□□□□ -1.64
USP29Q9HBJ7 AC098679.4-201ENST00000624241 654 ntBASIC4.8□□□□□ -1.64
USP29Q9HBJ7 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms