Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 SNORA31.9-201ENST00000516429 84 ntBASIC4.69□□□□□ -1.66
EBF3Q9H4W6 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.69□□□□□ -1.66
EBF3Q9H4W6 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
EBF3Q9H4W6 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.69□□□□□ -1.66
EBF3Q9H4W6 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC4.69□□□□□ -1.66
EBF3Q9H4W6 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.69□□□□□ -1.66
EBF3Q9H4W6 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.69□□□□□ -1.66
EBF3Q9H4W6 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.69□□□□□ -1.66
EBF3Q9H4W6 MIR3160-1-201ENST00000577972 85 ntBASIC4.69□□□□□ -1.66
EBF3Q9H4W6 ZNF415P1-201ENST00000582279 1166 ntBASIC4.69□□□□□ -1.66
EBF3Q9H4W6 AC078795.2-201ENST00000602835 1252 ntBASIC4.69□□□□□ -1.66
EBF3Q9H4W6 AP000254.1-201ENST00000609934 520 ntBASIC4.69□□□□□ -1.66
EBF3Q9H4W6 AC024257.5-201ENST00000612739 531 ntBASIC4.69□□□□□ -1.66
EBF3Q9H4W6 AC015540.1-201ENST00000615828 501 ntBASIC4.69□□□□□ -1.66
EBF3Q9H4W6 RNU6-368P-201ENST00000620928 107 ntBASIC4.69□□□□□ -1.66
EBF3Q9H4W6 RNU6-538P-201ENST00000622329 107 ntBASIC4.69□□□□□ -1.66
EBF3Q9H4W6 AC015804.1-201ENST00000622935 435 ntBASIC4.69□□□□□ -1.66
EBF3Q9H4W6 AC007490.1-201ENST00000624321 703 ntBASIC4.69□□□□□ -1.66
EBF3Q9H4W6 AC024023.1-201ENST00000624530 922 ntBASIC4.69□□□□□ -1.66
EBF3Q9H4W6 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.69□□□□□ -1.66
EBF3Q9H4W6 AL392088.2-201ENST00000637607 285 ntBASIC4.69□□□□□ -1.66
EBF3Q9H4W6 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.69□□□□□ -1.66
EBF3Q9H4W6 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
EBF3Q9H4W6 VN2R3P-201ENST00000422626 1412 ntBASIC4.69□□□□□ -1.66
EBF3Q9H4W6 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.69□□□□□ -1.66
EBF3Q9H4W6 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
EBF3Q9H4W6 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.69□□□□□ -1.66
EBF3Q9H4W6 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
EBF3Q9H4W6 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
EBF3Q9H4W6 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.68□□□□□ -1.66
EBF3Q9H4W6 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.68□□□□□ -1.66
EBF3Q9H4W6 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
EBF3Q9H4W6 AC068254.2-201ENST00000623938 3577 ntBASIC4.68□□□□□ -1.66
EBF3Q9H4W6 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
EBF3Q9H4W6 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.68□□□□□ -1.66
EBF3Q9H4W6 AL359922.3-201ENST00000624779 1670 ntBASIC4.68□□□□□ -1.66
EBF3Q9H4W6 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
EBF3Q9H4W6 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
EBF3Q9H4W6 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
EBF3Q9H4W6 RNA5SP515-201ENST00000364570 118 ntBASIC4.68□□□□□ -1.66
EBF3Q9H4W6 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC4.68□□□□□ -1.66
EBF3Q9H4W6 RNU6-517P-201ENST00000384362 110 ntBASIC4.68□□□□□ -1.66
EBF3Q9H4W6 MT-TP-201ENST00000387461 68 ntBASIC4.68□□□□□ -1.66
EBF3Q9H4W6 RSL24D1P4-201ENST00000400938 484 ntBASIC4.68□□□□□ -1.66
EBF3Q9H4W6 HMGB3P31-201ENST00000413333 595 ntBASIC4.68□□□□□ -1.66
EBF3Q9H4W6 RPS7P9-201ENST00000414704 586 ntBASIC4.68□□□□□ -1.66
EBF3Q9H4W6 LINC01347-201ENST00000417964 355 ntBASIC4.68□□□□□ -1.66
EBF3Q9H4W6 RPL30P16-201ENST00000419341 429 ntBASIC4.68□□□□□ -1.66
EBF3Q9H4W6 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC4.68□□□□□ -1.66
EBF3Q9H4W6 AL593851.1-201ENST00000426171 157 ntBASIC4.68□□□□□ -1.66
EBF3Q9H4W6 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.68□□□□□ -1.66
EBF3Q9H4W6 C8orf59P1-201ENST00000429930 303 ntBASIC4.68□□□□□ -1.66
EBF3Q9H4W6 ELOCP8-201ENST00000439309 332 ntBASIC4.68□□□□□ -1.66
EBF3Q9H4W6 ELOCP15-201ENST00000442090 332 ntBASIC4.68□□□□□ -1.66
EBF3Q9H4W6 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.68□□□□□ -1.66
EBF3Q9H4W6 AL050341.1-201ENST00000447743 313 ntBASIC4.68□□□□□ -1.66
EBF3Q9H4W6 RPL12P26-201ENST00000452430 487 ntBASIC4.68□□□□□ -1.66
EBF3Q9H4W6 HSPE1P22-201ENST00000456856 327 ntBASIC4.68□□□□□ -1.66
EBF3Q9H4W6 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.68□□□□□ -1.66
EBF3Q9H4W6 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.68□□□□□ -1.66
EBF3Q9H4W6 AC010460.1-201ENST00000507087 466 ntBASIC4.68□□□□□ -1.66
EBF3Q9H4W6 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.68□□□□□ -1.66
EBF3Q9H4W6 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.68□□□□□ -1.66
EBF3Q9H4W6 MTND4LP18-201ENST00000526864 291 ntBASIC4.68□□□□□ -1.66
EBF3Q9H4W6 CYCSP29-201ENST00000533731 318 ntBASIC4.68□□□□□ -1.66
EBF3Q9H4W6 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.68□□□□□ -1.66
EBF3Q9H4W6 AC006518.2-201ENST00000542513 940 ntBASIC4.68□□□□□ -1.66
EBF3Q9H4W6 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.68□□□□□ -1.66
EBF3Q9H4W6 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC4.68□□□□□ -1.66
EBF3Q9H4W6 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.68□□□□□ -1.66
EBF3Q9H4W6 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.68□□□□□ -1.66
EBF3Q9H4W6 RBM11P1-201ENST00000604951 799 ntBASIC4.68□□□□□ -1.66
EBF3Q9H4W6 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.68□□□□□ -1.66
EBF3Q9H4W6 AC072039.2-201ENST00000608883 439 ntBASIC4.68□□□□□ -1.66
EBF3Q9H4W6 AC068944.2-201ENST00000610373 403 ntBASIC4.68□□□□□ -1.66
EBF3Q9H4W6 AC073968.1-201ENST00000618594 637 ntBASIC4.68□□□□□ -1.66
EBF3Q9H4W6 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
EBF3Q9H4W6 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC4.68□□□□□ -1.66
EBF3Q9H4W6 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
EBF3Q9H4W6 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
EBF3Q9H4W6 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
EBF3Q9H4W6 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
EBF3Q9H4W6 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
EBF3Q9H4W6 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
EBF3Q9H4W6 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
EBF3Q9H4W6 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
EBF3Q9H4W6 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
EBF3Q9H4W6 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
EBF3Q9H4W6 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
EBF3Q9H4W6 Y_RNA.559-201ENST00000384686 107 ntBASIC4.67□□□□□ -1.66
EBF3Q9H4W6 SNORD65C-201ENST00000390962 71 ntBASIC4.67□□□□□ -1.66
EBF3Q9H4W6 SDHCP2-201ENST00000398565 501 ntBASIC4.67□□□□□ -1.66
EBF3Q9H4W6 DNAJC19P6-201ENST00000401853 280 ntBASIC4.67□□□□□ -1.66
EBF3Q9H4W6 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
EBF3Q9H4W6 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.67□□□□□ -1.66
EBF3Q9H4W6 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.67□□□□□ -1.66
EBF3Q9H4W6 RPS27AP12-201ENST00000429552 465 ntBASIC4.67□□□□□ -1.66
EBF3Q9H4W6 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC4.67□□□□□ -1.66
EBF3Q9H4W6 MTATP6P23-201ENST00000440153 476 ntBASIC4.67□□□□□ -1.66
EBF3Q9H4W6 AC097499.1-201ENST00000444277 208 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms