Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 AC090543.2-201ENST00000483963 348 ntBASIC3.98□□□□□ -1.77
UBQLN3Q9H347 AC004057.1-201ENST00000485827 348 ntBASIC3.98□□□□□ -1.77
UBQLN3Q9H347 RN7SL812P-201ENST00000493791 279 ntBASIC3.98□□□□□ -1.77
UBQLN3Q9H347 CAB39P1-201ENST00000502277 460 ntBASIC3.98□□□□□ -1.77
UBQLN3Q9H347 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC3.98□□□□□ -1.77
UBQLN3Q9H347 IGLVVI-25-1-201ENST00000521893 249 ntBASIC3.98□□□□□ -1.77
UBQLN3Q9H347 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.98□□□□□ -1.77
UBQLN3Q9H347 TRAV8-5-201ENST00000537369 341 ntBASIC3.98□□□□□ -1.77
UBQLN3Q9H347 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.98□□□□□ -1.77
UBQLN3Q9H347 CENPUP2-201ENST00000555897 1186 ntBASIC3.98□□□□□ -1.77
UBQLN3Q9H347 PSMB7P1-201ENST00000556349 514 ntBASIC3.98□□□□□ -1.77
UBQLN3Q9H347 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC3.98□□□□□ -1.77
UBQLN3Q9H347 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC3.98□□□□□ -1.77
UBQLN3Q9H347 KPNA2P3-201ENST00000584190 848 ntBASIC3.98□□□□□ -1.77
UBQLN3Q9H347 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.98□□□□□ -1.77
UBQLN3Q9H347 MIR3138-201ENST00000585238 82 ntBASIC3.98□□□□□ -1.77
UBQLN3Q9H347 AC096947.1-201ENST00000603233 470 ntBASIC3.98□□□□□ -1.77
UBQLN3Q9H347 AC008638.3-201ENST00000603341 463 ntBASIC3.98□□□□□ -1.77
UBQLN3Q9H347 AL590392.1-201ENST00000604960 446 ntBASIC3.98□□□□□ -1.77
UBQLN3Q9H347 AP000238.1-201ENST00000608759 426 ntBASIC3.98□□□□□ -1.77
UBQLN3Q9H347 AL031666.3-201ENST00000609320 1006 ntBASIC3.98□□□□□ -1.77
UBQLN3Q9H347 MIR6716-201ENST00000613413 80 ntBASIC3.98□□□□□ -1.77
UBQLN3Q9H347 AC104763.3-201ENST00000613765 618 ntBASIC3.98□□□□□ -1.77
UBQLN3Q9H347 MIR4496-201ENST00000635896 61 ntBASIC3.98□□□□□ -1.77
UBQLN3Q9H347 MIR6830-201ENST00000636015 70 ntBASIC3.98□□□□□ -1.77
UBQLN3Q9H347 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
UBQLN3Q9H347 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
UBQLN3Q9H347 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
UBQLN3Q9H347 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
UBQLN3Q9H347 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
UBQLN3Q9H347 NMD3P1-201ENST00000439704 1488 ntBASIC3.98□□□□□ -1.77
UBQLN3Q9H347 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
UBQLN3Q9H347 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.97□□□□□ -1.77
UBQLN3Q9H347 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.97□□□□□ -1.77
UBQLN3Q9H347 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
UBQLN3Q9H347 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
UBQLN3Q9H347 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
UBQLN3Q9H347 AC006971.1-201ENST00000407916 4486 ntBASIC3.97□□□□□ -1.77
UBQLN3Q9H347 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.97□□□□□ -1.77
UBQLN3Q9H347 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.97□□□□□ -1.77
UBQLN3Q9H347 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
UBQLN3Q9H347 RNA5SP366-201ENST00000365454 123 ntBASIC3.97□□□□□ -1.77
UBQLN3Q9H347 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.97□□□□□ -1.77
UBQLN3Q9H347 RNU6-356P-201ENST00000384140 107 ntBASIC3.97□□□□□ -1.77
UBQLN3Q9H347 AL049693.1-201ENST00000402760 611 ntBASIC3.97□□□□□ -1.77
UBQLN3Q9H347 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
UBQLN3Q9H347 RNU2-21P-201ENST00000410368 188 ntBASIC3.97□□□□□ -1.77
UBQLN3Q9H347 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.97□□□□□ -1.77
UBQLN3Q9H347 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC3.97□□□□□ -1.77
UBQLN3Q9H347 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.97□□□□□ -1.77
UBQLN3Q9H347 RPS6P12-201ENST00000432491 726 ntBASIC3.97□□□□□ -1.77
UBQLN3Q9H347 RPS3AP54-201ENST00000435535 734 ntBASIC3.97□□□□□ -1.77
UBQLN3Q9H347 RPL23AP52-201ENST00000439311 478 ntBASIC3.97□□□□□ -1.77
UBQLN3Q9H347 PTGES3P1-201ENST00000439531 483 ntBASIC3.97□□□□□ -1.77
UBQLN3Q9H347 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.97□□□□□ -1.77
UBQLN3Q9H347 NPM1P13-201ENST00000452663 865 ntBASIC3.97□□□□□ -1.77
UBQLN3Q9H347 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.97□□□□□ -1.77
UBQLN3Q9H347 AC010618.1-201ENST00000469924 477 ntBASIC3.97□□□□□ -1.77
UBQLN3Q9H347 AC087385.1-201ENST00000475062 312 ntBASIC3.97□□□□□ -1.77
UBQLN3Q9H347 AC091167.1-201ENST00000492017 396 ntBASIC3.97□□□□□ -1.77
UBQLN3Q9H347 AC011352.3-201ENST00000505162 593 ntBASIC3.97□□□□□ -1.77
UBQLN3Q9H347 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.97□□□□□ -1.77
UBQLN3Q9H347 AC109471.1-201ENST00000511631 612 ntBASIC3.97□□□□□ -1.77
UBQLN3Q9H347 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.97□□□□□ -1.77
UBQLN3Q9H347 RNU6-488P-201ENST00000515918 99 ntBASIC3.97□□□□□ -1.77
UBQLN3Q9H347 RN7SKP277-201ENST00000516895 283 ntBASIC3.97□□□□□ -1.77
UBQLN3Q9H347 IFITM8P-201ENST00000522529 394 ntBASIC3.97□□□□□ -1.77
UBQLN3Q9H347 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.97□□□□□ -1.77
UBQLN3Q9H347 AC021451.1-201ENST00000523498 1129 ntBASIC3.97□□□□□ -1.77
UBQLN3Q9H347 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.97□□□□□ -1.77
UBQLN3Q9H347 LRRC6P1-201ENST00000532188 885 ntBASIC3.97□□□□□ -1.77
UBQLN3Q9H347 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.97□□□□□ -1.77
UBQLN3Q9H347 AC023575.1-201ENST00000580510 358 ntBASIC3.97□□□□□ -1.77
UBQLN3Q9H347 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
UBQLN3Q9H347 AC069431.2-201ENST00000604149 1099 ntBASIC3.97□□□□□ -1.77
UBQLN3Q9H347 AL390816.3-201ENST00000604527 1066 ntBASIC3.97□□□□□ -1.77
UBQLN3Q9H347 AL583856.2-201ENST00000606298 543 ntBASIC3.97□□□□□ -1.77
UBQLN3Q9H347 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
UBQLN3Q9H347 RMST_9.1-201ENST00000619945 193 ntBASIC3.97□□□□□ -1.77
UBQLN3Q9H347 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.97□□□□□ -1.77
UBQLN3Q9H347 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.97□□□□□ -1.77
UBQLN3Q9H347 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
UBQLN3Q9H347 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
UBQLN3Q9H347 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
UBQLN3Q9H347 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
UBQLN3Q9H347 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
UBQLN3Q9H347 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
UBQLN3Q9H347 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.97□□□□□ -1.77
UBQLN3Q9H347 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
UBQLN3Q9H347 AC011266.1-201ENST00000624119 3569 ntBASIC3.97□□□□□ -1.77
UBQLN3Q9H347 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.97□□□□□ -1.77
UBQLN3Q9H347 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.97□□□□□ -1.77
UBQLN3Q9H347 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.77
UBQLN3Q9H347 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.77
UBQLN3Q9H347 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
UBQLN3Q9H347 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC3.96□□□□□ -1.78
UBQLN3Q9H347 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
UBQLN3Q9H347 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
UBQLN3Q9H347 ANKRD36P1-201ENST00000344424 659 ntBASIC3.96□□□□□ -1.78
UBQLN3Q9H347 RNU1-132P-201ENST00000364300 164 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms