Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 RNU6-699P-201ENST00000517081 110 ntBASIC6.28□□□□□ -1.4
COL25A1Q9BXS0 IGHV3-63-201ENST00000518422 341 ntBASIC6.28□□□□□ -1.4
COL25A1Q9BXS0 HMGB1P23-201ENST00000518743 568 ntBASIC6.28□□□□□ -1.4
COL25A1Q9BXS0 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC6.28□□□□□ -1.4
COL25A1Q9BXS0 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC6.28□□□□□ -1.4
COL25A1Q9BXS0 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC6.28□□□□□ -1.4
COL25A1Q9BXS0 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
COL25A1Q9BXS0 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.28□□□□□ -1.4
COL25A1Q9BXS0 AC106785.4-201ENST00000569492 412 ntBASIC6.28□□□□□ -1.4
COL25A1Q9BXS0 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC6.28□□□□□ -1.4
COL25A1Q9BXS0 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC6.28□□□□□ -1.4
COL25A1Q9BXS0 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
COL25A1Q9BXS0 AC091812.1-201ENST00000432235 1948 ntBASIC6.28□□□□□ -1.4
COL25A1Q9BXS0 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL25A1Q9BXS0 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
COL25A1Q9BXS0 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL25A1Q9BXS0 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL25A1Q9BXS0 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL25A1Q9BXS0 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC6.28□□□□□ -1.4
COL25A1Q9BXS0 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
COL25A1Q9BXS0 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL25A1Q9BXS0 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
COL25A1Q9BXS0 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC6.28□□□□□ -1.4
COL25A1Q9BXS0 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL25A1Q9BXS0 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
COL25A1Q9BXS0 SEM1-215ENST00000615352 2637 ntTSL 5 BASIC6.28□□□□□ -1.4
COL25A1Q9BXS0 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.4
COL25A1Q9BXS0 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 LCOR-201ENST00000286067 4542 ntBASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 RNU1-49P-201ENST00000363468 159 ntBASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 Y_RNA.167-201ENST00000363735 109 ntBASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 Y_RNA.210-201ENST00000364161 110 ntBASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 Y_RNA.462-201ENST00000384268 102 ntBASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 Y_RNA.483-201ENST00000384380 101 ntBASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 RPL9P21-201ENST00000392269 505 ntBASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 RPL21P1-201ENST00000399532 476 ntBASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 NDUFS5P1-201ENST00000405668 289 ntBASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 MIR1302-6-201ENST00000408466 90 ntBASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 RPL35AP3-201ENST00000414680 288 ntBASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 HNRNPA3P4-201ENST00000427514 803 ntBASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 PSMA6P3-201ENST00000428242 164 ntBASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 AC096775.1-201ENST00000437724 448 ntBASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 CYCSP12-201ENST00000437729 300 ntBASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 AC114755.4-201ENST00000439114 443 ntBASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 RPL21P2-201ENST00000440049 481 ntBASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 RPS3AP41-201ENST00000462701 778 ntBASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 RPL39P38-201ENST00000467018 153 ntBASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 RPL23AP11-201ENST00000475260 469 ntBASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 AC073610.1-201ENST00000489971 396 ntBASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 AC067942.3-201ENST00000512025 362 ntBASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 Y_RNA.673-201ENST00000516306 88 ntBASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 SNORD27.1-201ENST00000516319 72 ntBASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 RN7SKP219-201ENST00000516825 296 ntBASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 RNU6-111P-201ENST00000517179 105 ntBASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 AL118558.2-201ENST00000556294 238 ntBASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 AC015720.2-201ENST00000567709 334 ntBASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 MIR4424-201ENST00000585257 86 ntBASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 AP001521.1-201ENST00000609150 300 ntBASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 RMST-210ENST00000640149 2844 ntTSL 5 BASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 BOLL-204ENST00000430004 2987 ntTSL 2 BASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 HSPA8P18-201ENST00000439846 1928 ntBASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 AC074141.1-201ENST00000588129 2995 ntBASIC6.27□□□□□ -1.41
COL25A1Q9BXS0 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms