Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.56□□□□□ -1.52
ERCC4Q92889 DUXAP2-201ENST00000519198 589 ntBASIC5.56□□□□□ -1.52
ERCC4Q92889 AP001207.1-201ENST00000524051 481 ntBASIC5.56□□□□□ -1.52
ERCC4Q92889 MTCYBP41-201ENST00000528913 1123 ntBASIC5.56□□□□□ -1.52
ERCC4Q92889 AC107918.3-201ENST00000533272 382 ntBASIC5.56□□□□□ -1.52
ERCC4Q92889 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC5.56□□□□□ -1.52
ERCC4Q92889 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC5.56□□□□□ -1.52
ERCC4Q92889 AC087477.6-201ENST00000559595 843 ntBASIC5.56□□□□□ -1.52
ERCC4Q92889 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.56□□□□□ -1.52
ERCC4Q92889 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC5.56□□□□□ -1.52
ERCC4Q92889 MIR1269B-201ENST00000580405 75 ntBASIC5.56□□□□□ -1.52
ERCC4Q92889 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
ERCC4Q92889 AC104687.2-201ENST00000604442 342 ntBASIC5.56□□□□□ -1.52
ERCC4Q92889 AC068276.1-201ENST00000605793 379 ntBASIC5.56□□□□□ -1.52
ERCC4Q92889 AL512329.2-201ENST00000607350 548 ntBASIC5.56□□□□□ -1.52
ERCC4Q92889 BX323046.1-201ENST00000610145 535 ntBASIC5.56□□□□□ -1.52
ERCC4Q92889 AL627230.1-201ENST00000613077 211 ntBASIC5.56□□□□□ -1.52
ERCC4Q92889 AL591926.8-201ENST00000616876 211 ntBASIC5.56□□□□□ -1.52
ERCC4Q92889 AL022401.1-201ENST00000619498 108 ntBASIC5.56□□□□□ -1.52
ERCC4Q92889 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC5.56□□□□□ -1.52
ERCC4Q92889 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.56□□□□□ -1.52
ERCC4Q92889 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.56□□□□□ -1.52
ERCC4Q92889 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
ERCC4Q92889 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
ERCC4Q92889 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
ERCC4Q92889 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
ERCC4Q92889 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
ERCC4Q92889 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
ERCC4Q92889 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.56□□□□□ -1.52
ERCC4Q92889 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.55□□□□□ -1.52
ERCC4Q92889 SCARNA15-201ENST00000607520 4325 ntBASIC5.55□□□□□ -1.52
ERCC4Q92889 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
ERCC4Q92889 AC107982.1-201ENST00000507171 1300 ntBASIC5.55□□□□□ -1.52
ERCC4Q92889 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC5.55□□□□□ -1.52
ERCC4Q92889 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.55□□□□□ -1.52
ERCC4Q92889 SNORA51.12-201ENST00000384448 134 ntBASIC5.55□□□□□ -1.52
ERCC4Q92889 RPS24P12-201ENST00000402084 394 ntBASIC5.55□□□□□ -1.52
ERCC4Q92889 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.55□□□□□ -1.52
ERCC4Q92889 MIR1284-201ENST00000408337 120 ntBASIC5.55□□□□□ -1.52
ERCC4Q92889 Y_RNA.604-201ENST00000410574 102 ntBASIC5.55□□□□□ -1.52
ERCC4Q92889 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC5.55□□□□□ -1.52
ERCC4Q92889 RPS7P13-201ENST00000413955 498 ntBASIC5.55□□□□□ -1.52
ERCC4Q92889 TMBIM7P-201ENST00000418074 855 ntBASIC5.55□□□□□ -1.52
ERCC4Q92889 UBTFL3-201ENST00000418934 1024 ntBASIC5.55□□□□□ -1.52
ERCC4Q92889 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC5.55□□□□□ -1.52
ERCC4Q92889 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC5.55□□□□□ -1.52
ERCC4Q92889 AC073069.1-201ENST00000428657 441 ntBASIC5.55□□□□□ -1.52
ERCC4Q92889 AL513175.1-201ENST00000431492 780 ntBASIC5.55□□□□□ -1.52
ERCC4Q92889 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.55□□□□□ -1.52
ERCC4Q92889 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
ERCC4Q92889 RPL7P59-201ENST00000447700 943 ntBASIC5.55□□□□□ -1.52
ERCC4Q92889 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC5.55□□□□□ -1.52
ERCC4Q92889 RPL23AP35-201ENST00000451906 501 ntBASIC5.55□□□□□ -1.52
ERCC4Q92889 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC5.55□□□□□ -1.52
ERCC4Q92889 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.55□□□□□ -1.52
ERCC4Q92889 RPL23AP71-201ENST00000470966 469 ntBASIC5.55□□□□□ -1.52
ERCC4Q92889 UBTFL6-201ENST00000477929 1024 ntBASIC5.55□□□□□ -1.52
ERCC4Q92889 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.55□□□□□ -1.52
ERCC4Q92889 SETP14-201ENST00000497538 873 ntBASIC5.55□□□□□ -1.52
ERCC4Q92889 AC096751.1-202ENST00000502691 1067 ntBASIC5.55□□□□□ -1.52
ERCC4Q92889 ARL2BPP4-201ENST00000506854 471 ntBASIC5.55□□□□□ -1.52
ERCC4Q92889 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC5.55□□□□□ -1.52
ERCC4Q92889 RPL37P25-201ENST00000507308 276 ntBASIC5.55□□□□□ -1.52
ERCC4Q92889 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC5.55□□□□□ -1.52
ERCC4Q92889 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC5.55□□□□□ -1.52
ERCC4Q92889 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC5.55□□□□□ -1.52
ERCC4Q92889 RNA5SP392-201ENST00000516905 112 ntBASIC5.55□□□□□ -1.52
ERCC4Q92889 MTND4LP26-201ENST00000518144 282 ntBASIC5.55□□□□□ -1.52
ERCC4Q92889 AP001189.2-201ENST00000527320 189 ntBASIC5.55□□□□□ -1.52
ERCC4Q92889 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.55□□□□□ -1.52
ERCC4Q92889 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.55□□□□□ -1.52
ERCC4Q92889 DYNLL1P4-201ENST00000549314 266 ntBASIC5.55□□□□□ -1.52
ERCC4Q92889 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
ERCC4Q92889 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC5.55□□□□□ -1.52
ERCC4Q92889 TRAV15-201ENST00000556680 249 ntBASIC5.55□□□□□ -1.52
ERCC4Q92889 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
ERCC4Q92889 AC090186.1-201ENST00000605991 572 ntBASIC5.55□□□□□ -1.52
ERCC4Q92889 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC5.55□□□□□ -1.52
ERCC4Q92889 AC015804.1-201ENST00000622935 435 ntBASIC5.55□□□□□ -1.52
ERCC4Q92889 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.55□□□□□ -1.52
ERCC4Q92889 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.55□□□□□ -1.52
ERCC4Q92889 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
ERCC4Q92889 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
ERCC4Q92889 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
ERCC4Q92889 PABPC1P6-201ENST00000445594 1829 ntBASIC5.55□□□□□ -1.52
ERCC4Q92889 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
ERCC4Q92889 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
ERCC4Q92889 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.55□□□□□ -1.52
ERCC4Q92889 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.54□□□□□ -1.52
ERCC4Q92889 AC119744.1-201ENST00000454746 1715 ntBASIC5.54□□□□□ -1.52
ERCC4Q92889 AL590763.1-201ENST00000398297 1545 ntBASIC5.54□□□□□ -1.52
ERCC4Q92889 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
ERCC4Q92889 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
ERCC4Q92889 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
ERCC4Q92889 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
ERCC4Q92889 RNU6-660P-201ENST00000364566 109 ntBASIC5.54□□□□□ -1.52
ERCC4Q92889 RNY3P10-201ENST00000384764 102 ntBASIC5.54□□□□□ -1.52
ERCC4Q92889 AL133264.1-201ENST00000407157 562 ntBASIC5.54□□□□□ -1.52
ERCC4Q92889 RNU2-66P-201ENST00000410650 161 ntBASIC5.54□□□□□ -1.52
ERCC4Q92889 BOLA3P4-201ENST00000418151 400 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 140.6 ms