Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
AP3S1Q92572 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
AP3S1Q92572 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.15□□□□□ -1.91
AP3S1Q92572 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
AP3S1Q92572 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.14□□□□□ -1.91
AP3S1Q92572 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
AP3S1Q92572 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
AP3S1Q92572 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.14□□□□□ -1.91
AP3S1Q92572 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.14□□□□□ -1.91
AP3S1Q92572 RARSP1-201ENST00000542842 1418 ntBASIC3.14□□□□□ -1.91
AP3S1Q92572 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
AP3S1Q92572 SNORA7.2-201ENST00000364446 145 ntBASIC3.14□□□□□ -1.91
AP3S1Q92572 RPS26P13-201ENST00000419030 330 ntBASIC3.14□□□□□ -1.91
AP3S1Q92572 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.14□□□□□ -1.91
AP3S1Q92572 DNAJC19P7-201ENST00000428811 344 ntBASIC3.14□□□□□ -1.91
AP3S1Q92572 HMGN2P20-201ENST00000437531 273 ntBASIC3.14□□□□□ -1.91
AP3S1Q92572 ISCA1P2-201ENST00000438679 421 ntBASIC3.14□□□□□ -1.91
AP3S1Q92572 CBX1P1-201ENST00000440184 427 ntBASIC3.14□□□□□ -1.91
AP3S1Q92572 MTND2P8-201ENST00000450555 1025 ntBASIC3.14□□□□□ -1.91
AP3S1Q92572 CYCSP53-201ENST00000455540 265 ntBASIC3.14□□□□□ -1.91
AP3S1Q92572 HMGN2P16-201ENST00000456802 261 ntBASIC3.14□□□□□ -1.91
AP3S1Q92572 ARPC3P2-201ENST00000457786 533 ntBASIC3.14□□□□□ -1.91
AP3S1Q92572 RN7SL594P-201ENST00000470590 287 ntBASIC3.14□□□□□ -1.91
AP3S1Q92572 VN1R17P-201ENST00000472048 1090 ntBASIC3.14□□□□□ -1.91
AP3S1Q92572 AC023598.1-201ENST00000472521 361 ntBASIC3.14□□□□□ -1.91
AP3S1Q92572 AC006463.2-201ENST00000473326 348 ntBASIC3.14□□□□□ -1.91
AP3S1Q92572 NCOR1P1-202ENST00000486162 291 ntBASIC3.14□□□□□ -1.91
AP3S1Q92572 CDH12P2-201ENST00000504393 298 ntBASIC3.14□□□□□ -1.91
AP3S1Q92572 AC093755.1-201ENST00000512950 1023 ntBASIC3.14□□□□□ -1.91
AP3S1Q92572 AC104027.1-201ENST00000521887 300 ntBASIC3.14□□□□□ -1.91
AP3S1Q92572 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.14□□□□□ -1.91
AP3S1Q92572 OR8L1P-201ENST00000534005 955 ntBASIC3.14□□□□□ -1.91
AP3S1Q92572 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.14□□□□□ -1.91
AP3S1Q92572 AC023161.2-201ENST00000551218 780 ntBASIC3.14□□□□□ -1.91
AP3S1Q92572 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.14□□□□□ -1.91
AP3S1Q92572 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.14□□□□□ -1.91
AP3S1Q92572 AC006077.1-201ENST00000604746 343 ntBASIC3.14□□□□□ -1.91
AP3S1Q92572 MIR3653-201ENST00000625572 110 ntBASIC3.14□□□□□ -1.91
AP3S1Q92572 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.14□□□□□ -1.91
AP3S1Q92572 MAPK10-362ENST00000641864 4484 ntBASIC3.14□□□□□ -1.91
AP3S1Q92572 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.14□□□□□ -1.91
AP3S1Q92572 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.14□□□□□ -1.91
AP3S1Q92572 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC3.14□□□□□ -1.91
AP3S1Q92572 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.13□□□□□ -1.91
AP3S1Q92572 MTND4P34-201ENST00000572715 1371 ntBASIC3.13□□□□□ -1.91
AP3S1Q92572 AC090337.1-201ENST00000579651 2074 ntBASIC3.13□□□□□ -1.91
AP3S1Q92572 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
AP3S1Q92572 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
AP3S1Q92572 AL136164.4-201ENST00000625013 2135 ntBASIC3.13□□□□□ -1.91
AP3S1Q92572 SRP72P2-201ENST00000344851 1979 ntBASIC3.13□□□□□ -1.91
AP3S1Q92572 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
AP3S1Q92572 AC079741.1-201ENST00000321498 212 ntBASIC3.13□□□□□ -1.91
AP3S1Q92572 RNU6-600P-201ENST00000362524 99 ntBASIC3.13□□□□□ -1.91
AP3S1Q92572 SNORD56.3-201ENST00000363507 71 ntBASIC3.13□□□□□ -1.91
AP3S1Q92572 SNORA51.2-201ENST00000364595 132 ntBASIC3.13□□□□□ -1.91
AP3S1Q92572 MTND4P22-201ENST00000413116 1169 ntBASIC3.13□□□□□ -1.91
AP3S1Q92572 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC3.13□□□□□ -1.91
AP3S1Q92572 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC3.13□□□□□ -1.91
AP3S1Q92572 TBCAP1-201ENST00000436520 327 ntBASIC3.13□□□□□ -1.91
AP3S1Q92572 RPL7P61-201ENST00000451721 751 ntBASIC3.13□□□□□ -1.91
AP3S1Q92572 UQCRHP4-201ENST00000471686 272 ntBASIC3.13□□□□□ -1.91
AP3S1Q92572 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.13□□□□□ -1.91
AP3S1Q92572 SETP14-201ENST00000497538 873 ntBASIC3.13□□□□□ -1.91
AP3S1Q92572 AC090071.1-201ENST00000507713 644 ntBASIC3.13□□□□□ -1.91
AP3S1Q92572 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC3.13□□□□□ -1.91
AP3S1Q92572 RNA5SP380-201ENST00000517190 98 ntBASIC3.13□□□□□ -1.91
AP3S1Q92572 MTCO1P49-201ENST00000523429 802 ntBASIC3.13□□□□□ -1.91
AP3S1Q92572 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.13□□□□□ -1.91
AP3S1Q92572 AC090888.3-201ENST00000558917 509 ntBASIC3.13□□□□□ -1.91
AP3S1Q92572 MIR4474-201ENST00000579189 78 ntBASIC3.13□□□□□ -1.91
AP3S1Q92572 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
AP3S1Q92572 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC3.13□□□□□ -1.91
AP3S1Q92572 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
AP3S1Q92572 AL357559.1-201ENST00000622228 274 ntBASIC3.13□□□□□ -1.91
AP3S1Q92572 AC073476.4-201ENST00000628409 72 ntBASIC3.13□□□□□ -1.91
AP3S1Q92572 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC3.13□□□□□ -1.91
AP3S1Q92572 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
AP3S1Q92572 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
AP3S1Q92572 AC007656.2-201ENST00000624902 4547 ntBASIC3.13□□□□□ -1.91
AP3S1Q92572 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
AP3S1Q92572 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
AP3S1Q92572 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
AP3S1Q92572 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.12□□□□□ -1.91
AP3S1Q92572 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.12□□□□□ -1.91
AP3S1Q92572 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.12□□□□□ -1.91
AP3S1Q92572 CNOT6LP1-201ENST00000559681 1462 ntBASIC3.12□□□□□ -1.91
AP3S1Q92572 OR4A15-201ENST00000314706 1035 ntBASIC3.12□□□□□ -1.91
AP3S1Q92572 RNA5SP447-201ENST00000363749 119 ntBASIC3.12□□□□□ -1.91
AP3S1Q92572 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
AP3S1Q92572 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
AP3S1Q92572 RPS16P5-201ENST00000406501 404 ntBASIC3.12□□□□□ -1.91
AP3S1Q92572 RNU4-6P-201ENST00000410804 122 ntBASIC3.12□□□□□ -1.91
AP3S1Q92572 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.12□□□□□ -1.91
AP3S1Q92572 AC069213.2-201ENST00000420238 366 ntBASIC3.12□□□□□ -1.91
AP3S1Q92572 COX6CP15-201ENST00000426313 211 ntBASIC3.12□□□□□ -1.91
AP3S1Q92572 AL360081.1-201ENST00000428299 555 ntBASIC3.12□□□□□ -1.91
AP3S1Q92572 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC3.12□□□□□ -1.91
AP3S1Q92572 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.12□□□□□ -1.91
AP3S1Q92572 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
AP3S1Q92572 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms