Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.31□□□□□ -1.56
NUP43Q8NFH3 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC5.31□□□□□ -1.56
NUP43Q8NFH3 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC5.31□□□□□ -1.56
NUP43Q8NFH3 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC5.31□□□□□ -1.56
NUP43Q8NFH3 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NUP43Q8NFH3 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NUP43Q8NFH3 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.31□□□□□ -1.56
NUP43Q8NFH3 AL352984.2-201ENST00000611153 546 ntBASIC5.31□□□□□ -1.56
NUP43Q8NFH3 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.31□□□□□ -1.56
NUP43Q8NFH3 AL365204.3-201ENST00000612448 685 ntBASIC5.31□□□□□ -1.56
NUP43Q8NFH3 AC024940.5-201ENST00000622889 474 ntBASIC5.31□□□□□ -1.56
NUP43Q8NFH3 AC015871.5-202ENST00000623252 701 ntBASIC5.31□□□□□ -1.56
NUP43Q8NFH3 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.31□□□□□ -1.56
NUP43Q8NFH3 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.31□□□□□ -1.56
NUP43Q8NFH3 AP000473.2-201ENST00000602659 1537 ntBASIC5.31□□□□□ -1.56
NUP43Q8NFH3 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.31□□□□□ -1.56
NUP43Q8NFH3 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.31□□□□□ -1.56
NUP43Q8NFH3 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.31□□□□□ -1.56
NUP43Q8NFH3 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NUP43Q8NFH3 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
NUP43Q8NFH3 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.31□□□□□ -1.56
NUP43Q8NFH3 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NUP43Q8NFH3 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NUP43Q8NFH3 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.31□□□□□ -1.56
NUP43Q8NFH3 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NUP43Q8NFH3 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
NUP43Q8NFH3 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NUP43Q8NFH3 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
NUP43Q8NFH3 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.3□□□□□ -1.56
NUP43Q8NFH3 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.3□□□□□ -1.56
NUP43Q8NFH3 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NUP43Q8NFH3 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
NUP43Q8NFH3 AL360270.2-201ENST00000562952 5985 ntBASIC5.3□□□□□ -1.56
NUP43Q8NFH3 ZNF33BP1-201ENST00000452497 1834 ntBASIC5.3□□□□□ -1.56
NUP43Q8NFH3 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NUP43Q8NFH3 LINC00622-201ENST00000562811 1570 ntBASIC5.3□□□□□ -1.56
NUP43Q8NFH3 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NUP43Q8NFH3 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.3□□□□□ -1.56
NUP43Q8NFH3 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NUP43Q8NFH3 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.3□□□□□ -1.56
NUP43Q8NFH3 RNA5SP326-201ENST00000363209 110 ntBASIC5.3□□□□□ -1.56
NUP43Q8NFH3 RNU11-201ENST00000387069 134 ntBASIC5.3□□□□□ -1.56
NUP43Q8NFH3 U3.23-201ENST00000391132 200 ntBASIC5.3□□□□□ -1.56
NUP43Q8NFH3 FGFR1OP2P1-201ENST00000395943 500 ntBASIC5.3□□□□□ -1.56
NUP43Q8NFH3 AC127391.1-201ENST00000411737 98 ntBASIC5.3□□□□□ -1.56
NUP43Q8NFH3 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.3□□□□□ -1.56
NUP43Q8NFH3 MTATP6P18-201ENST00000417994 673 ntBASIC5.3□□□□□ -1.56
NUP43Q8NFH3 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NUP43Q8NFH3 MTND2P23-201ENST00000422990 651 ntBASIC5.3□□□□□ -1.56
NUP43Q8NFH3 HMGB3P24-201ENST00000433260 622 ntBASIC5.3□□□□□ -1.56
NUP43Q8NFH3 RPS26P40-201ENST00000435209 294 ntBASIC5.3□□□□□ -1.56
NUP43Q8NFH3 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC5.3□□□□□ -1.56
NUP43Q8NFH3 RPL31P15-201ENST00000449770 338 ntBASIC5.3□□□□□ -1.56
NUP43Q8NFH3 AC233279.1-201ENST00000455300 423 ntBASIC5.3□□□□□ -1.56
NUP43Q8NFH3 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NUP43Q8NFH3 SNORD125-201ENST00000459538 96 ntBASIC5.3□□□□□ -1.56
NUP43Q8NFH3 AC007537.2-201ENST00000472093 511 ntBASIC5.3□□□□□ -1.56
NUP43Q8NFH3 AC022215.1-201ENST00000481770 362 ntBASIC5.3□□□□□ -1.56
NUP43Q8NFH3 RPL7P51-201ENST00000490532 749 ntBASIC5.3□□□□□ -1.56
NUP43Q8NFH3 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC5.3□□□□□ -1.56
NUP43Q8NFH3 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.3□□□□□ -1.56
NUP43Q8NFH3 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.3□□□□□ -1.56
NUP43Q8NFH3 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.3□□□□□ -1.56
NUP43Q8NFH3 COX6CP8-201ENST00000522620 226 ntBASIC5.3□□□□□ -1.56
NUP43Q8NFH3 OR5M2P-201ENST00000529003 936 ntBASIC5.3□□□□□ -1.56
NUP43Q8NFH3 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.3□□□□□ -1.56
NUP43Q8NFH3 AC243972.3-201ENST00000539655 198 ntBASIC5.3□□□□□ -1.56
NUP43Q8NFH3 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.3□□□□□ -1.56
NUP43Q8NFH3 HSPE1P3-201ENST00000559254 309 ntBASIC5.3□□□□□ -1.56
NUP43Q8NFH3 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC5.3□□□□□ -1.56
NUP43Q8NFH3 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.3□□□□□ -1.56
NUP43Q8NFH3 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC5.3□□□□□ -1.56
NUP43Q8NFH3 AC090312.1-201ENST00000580637 348 ntBASIC5.3□□□□□ -1.56
NUP43Q8NFH3 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.3□□□□□ -1.56
NUP43Q8NFH3 SNORD39.3-201ENST00000584451 71 ntBASIC5.3□□□□□ -1.56
NUP43Q8NFH3 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.3□□□□□ -1.56
NUP43Q8NFH3 AL360012.1-201ENST00000602813 131 ntBASIC5.3□□□□□ -1.56
NUP43Q8NFH3 AL138895.2-201ENST00000603019 178 ntBASIC5.3□□□□□ -1.56
NUP43Q8NFH3 AL445222.1-201ENST00000607259 628 ntBASIC5.3□□□□□ -1.56
NUP43Q8NFH3 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC5.3□□□□□ -1.56
NUP43Q8NFH3 AL133173.2-201ENST00000614270 90 ntBASIC5.3□□□□□ -1.56
NUP43Q8NFH3 AC005858.4-201ENST00000623191 700 ntBASIC5.3□□□□□ -1.56
NUP43Q8NFH3 SRP54-214ENST00000630962 162 ntTSL 5 BASIC5.3□□□□□ -1.56
NUP43Q8NFH3 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
NUP43Q8NFH3 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
NUP43Q8NFH3 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NUP43Q8NFH3 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NUP43Q8NFH3 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.3□□□□□ -1.56
NUP43Q8NFH3 GTF2IP4-201ENST00000453092 2054 ntBASIC5.3□□□□□ -1.56
NUP43Q8NFH3 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NUP43Q8NFH3 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
NUP43Q8NFH3 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.3□□□□□ -1.56
NUP43Q8NFH3 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NUP43Q8NFH3 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
NUP43Q8NFH3 AC097504.1-201ENST00000515103 2415 ntBASIC5.29□□□□□ -1.56
NUP43Q8NFH3 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NUP43Q8NFH3 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NUP43Q8NFH3 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
NUP43Q8NFH3 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NUP43Q8NFH3 AC009962.1-201ENST00000567327 3813 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms