Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 NELL2-211ENST00000548826 559 ntTSL 2 BASIC6.03□□□□□ -1.44
RNF43Q68DV7 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC6.03□□□□□ -1.44
RNF43Q68DV7 AC055876.1-202ENST00000567053 138 ntBASIC6.03□□□□□ -1.44
RNF43Q68DV7 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC6.03□□□□□ -1.44
RNF43Q68DV7 AC005668.1-201ENST00000571142 476 ntBASIC6.03□□□□□ -1.44
RNF43Q68DV7 AC007342.5-201ENST00000571340 2142 ntBASIC6.03□□□□□ -1.44
RNF43Q68DV7 TXNP4-201ENST00000575018 310 ntBASIC6.03□□□□□ -1.44
RNF43Q68DV7 MIR1269B-201ENST00000580405 75 ntBASIC6.03□□□□□ -1.44
RNF43Q68DV7 MIR3149-201ENST00000584629 83 ntBASIC6.03□□□□□ -1.44
RNF43Q68DV7 HMGN1P30-201ENST00000589286 268 ntBASIC6.03□□□□□ -1.44
RNF43Q68DV7 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.03□□□□□ -1.44
RNF43Q68DV7 FAM27E4-201ENST00000605259 342 ntBASIC6.03□□□□□ -1.44
RNF43Q68DV7 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC6.03□□□□□ -1.44
RNF43Q68DV7 uc_338.26-201ENST00000612659 160 ntBASIC6.03□□□□□ -1.44
RNF43Q68DV7 AC138649.5-201ENST00000637456 137 ntBASIC6.03□□□□□ -1.44
RNF43Q68DV7 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RNF43Q68DV7 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
RNF43Q68DV7 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RNF43Q68DV7 LARP1BP1-201ENST00000506036 1359 ntBASIC6.03□□□□□ -1.44
RNF43Q68DV7 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.03□□□□□ -1.44
RNF43Q68DV7 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC6.03□□□□□ -1.44
RNF43Q68DV7 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RNF43Q68DV7 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RNF43Q68DV7 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
RNF43Q68DV7 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.03□□□□□ -1.44
RNF43Q68DV7 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RNF43Q68DV7 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
RNF43Q68DV7 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
RNF43Q68DV7 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RNF43Q68DV7 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RNF43Q68DV7 AL591135.1-201ENST00000401578 5914 ntBASIC6.02□□□□□ -1.45
RNF43Q68DV7 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RNF43Q68DV7 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
RNF43Q68DV7 MAPK6PS2-201ENST00000379571 2060 ntBASIC6.02□□□□□ -1.45
RNF43Q68DV7 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.02□□□□□ -1.45
RNF43Q68DV7 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.02□□□□□ -1.45
RNF43Q68DV7 AC003985.2-201ENST00000562268 1669 ntBASIC6.02□□□□□ -1.45
RNF43Q68DV7 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC6.02□□□□□ -1.45
RNF43Q68DV7 RNU6-1066P-201ENST00000363573 105 ntBASIC6.02□□□□□ -1.45
RNF43Q68DV7 Y_RNA.159-201ENST00000363674 87 ntBASIC6.02□□□□□ -1.45
RNF43Q68DV7 RNU6-282P-201ENST00000365357 103 ntBASIC6.02□□□□□ -1.45
RNF43Q68DV7 RNU6-639P-201ENST00000384074 107 ntBASIC6.02□□□□□ -1.45
RNF43Q68DV7 RNU6-74P-201ENST00000384235 107 ntBASIC6.02□□□□□ -1.45
RNF43Q68DV7 RNU6-452P-201ENST00000384406 107 ntBASIC6.02□□□□□ -1.45
RNF43Q68DV7 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
RNF43Q68DV7 AL603908.1-201ENST00000406098 201 ntBASIC6.02□□□□□ -1.45
RNF43Q68DV7 SNORA11C-201ENST00000408532 129 ntBASIC6.02□□□□□ -1.45
RNF43Q68DV7 NAP1L1P2-201ENST00000414182 1089 ntBASIC6.02□□□□□ -1.45
RNF43Q68DV7 MRPL53P1-201ENST00000414323 319 ntBASIC6.02□□□□□ -1.45
RNF43Q68DV7 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC6.02□□□□□ -1.45
RNF43Q68DV7 AL953862.1-201ENST00000423016 168 ntBASIC6.02□□□□□ -1.45
RNF43Q68DV7 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
RNF43Q68DV7 AC109583.1-201ENST00000432156 268 ntBASIC6.02□□□□□ -1.45
RNF43Q68DV7 SKP1P1-201ENST00000438081 489 ntBASIC6.02□□□□□ -1.45
RNF43Q68DV7 RPL5P25-201ENST00000441148 775 ntBASIC6.02□□□□□ -1.45
RNF43Q68DV7 MED28P3-201ENST00000444288 531 ntBASIC6.02□□□□□ -1.45
RNF43Q68DV7 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC6.02□□□□□ -1.45
RNF43Q68DV7 ACA64.4-201ENST00000459070 127 ntBASIC6.02□□□□□ -1.45
RNF43Q68DV7 RNU6-445P-201ENST00000516949 107 ntBASIC6.02□□□□□ -1.45
RNF43Q68DV7 RNU6-835P-201ENST00000516974 104 ntBASIC6.02□□□□□ -1.45
RNF43Q68DV7 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.02□□□□□ -1.45
RNF43Q68DV7 AC107953.1-201ENST00000522216 297 ntBASIC6.02□□□□□ -1.45
RNF43Q68DV7 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC6.02□□□□□ -1.45
RNF43Q68DV7 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC6.02□□□□□ -1.45
RNF43Q68DV7 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC6.02□□□□□ -1.45
RNF43Q68DV7 OR5BN1P-201ENST00000532955 829 ntBASIC6.02□□□□□ -1.45
RNF43Q68DV7 DERA-209ENST00000532964 854 ntTSL 5 BASIC6.02□□□□□ -1.45
RNF43Q68DV7 AC023050.3-201ENST00000541142 333 ntBASIC6.02□□□□□ -1.45
RNF43Q68DV7 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC6.02□□□□□ -1.45
RNF43Q68DV7 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.02□□□□□ -1.45
RNF43Q68DV7 MIR4307-201ENST00000582802 84 ntBASIC6.02□□□□□ -1.45
RNF43Q68DV7 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.02□□□□□ -1.45
RNF43Q68DV7 AL355472.4-201ENST00000610233 626 ntBASIC6.02□□□□□ -1.45
RNF43Q68DV7 MIR6748-201ENST00000610433 71 ntBASIC6.02□□□□□ -1.45
RNF43Q68DV7 AC015712.7-201ENST00000615211 635 ntBASIC6.02□□□□□ -1.45
RNF43Q68DV7 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.02□□□□□ -1.45
RNF43Q68DV7 AL732618.1-201ENST00000623251 301 ntBASIC6.02□□□□□ -1.45
RNF43Q68DV7 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RNF43Q68DV7 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RNF43Q68DV7 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
RNF43Q68DV7 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
RNF43Q68DV7 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
RNF43Q68DV7 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC6.02□□□□□ -1.45
RNF43Q68DV7 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
RNF43Q68DV7 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.02□□□□□ -1.45
RNF43Q68DV7 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RNF43Q68DV7 MTND4P1-201ENST00000457501 1466 ntBASIC6.02□□□□□ -1.45
RNF43Q68DV7 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
RNF43Q68DV7 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
RNF43Q68DV7 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
RNF43Q68DV7 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
RNF43Q68DV7 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
RNF43Q68DV7 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
RNF43Q68DV7 AC109780.1-201ENST00000451768 1344 ntBASIC6.01□□□□□ -1.45
RNF43Q68DV7 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
RNF43Q68DV7 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
RNF43Q68DV7 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
RNF43Q68DV7 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
RNF43Q68DV7 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
RNF43Q68DV7 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms