Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 MTND4LP3-201ENST00000468320 276 ntBASIC4.82□□□□□ -1.64
RNF220Q5VTB9 RN7SL817P-201ENST00000480777 288 ntBASIC4.82□□□□□ -1.64
RNF220Q5VTB9 NIP7P2-201ENST00000485801 544 ntBASIC4.82□□□□□ -1.64
RNF220Q5VTB9 AC109486.1-201ENST00000486833 374 ntBASIC4.82□□□□□ -1.64
RNF220Q5VTB9 RN7SL547P-201ENST00000490793 290 ntBASIC4.82□□□□□ -1.64
RNF220Q5VTB9 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.82□□□□□ -1.64
RNF220Q5VTB9 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.82□□□□□ -1.64
RNF220Q5VTB9 STMN1P2-201ENST00000508435 439 ntBASIC4.82□□□□□ -1.64
RNF220Q5VTB9 RNA5SP373-201ENST00000517271 95 ntBASIC4.82□□□□□ -1.64
RNF220Q5VTB9 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.82□□□□□ -1.64
RNF220Q5VTB9 AC022861.1-201ENST00000522981 663 ntBASIC4.82□□□□□ -1.64
RNF220Q5VTB9 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC4.82□□□□□ -1.64
RNF220Q5VTB9 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.82□□□□□ -1.64
RNF220Q5VTB9 CENPUP2-201ENST00000555897 1186 ntBASIC4.82□□□□□ -1.64
RNF220Q5VTB9 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.82□□□□□ -1.64
RNF220Q5VTB9 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC4.82□□□□□ -1.64
RNF220Q5VTB9 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.82□□□□□ -1.64
RNF220Q5VTB9 RPL10P14-201ENST00000565265 298 ntBASIC4.82□□□□□ -1.64
RNF220Q5VTB9 CYCSP40-201ENST00000575927 294 ntBASIC4.82□□□□□ -1.64
RNF220Q5VTB9 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RNF220Q5VTB9 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
RNF220Q5VTB9 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.82□□□□□ -1.64
RNF220Q5VTB9 AC104687.2-201ENST00000604442 342 ntBASIC4.82□□□□□ -1.64
RNF220Q5VTB9 AC115621.1-201ENST00000604653 858 ntBASIC4.82□□□□□ -1.64
RNF220Q5VTB9 AC092354.1-201ENST00000606057 376 ntBASIC4.82□□□□□ -1.64
RNF220Q5VTB9 AC015982.1-201ENST00000608113 465 ntBASIC4.82□□□□□ -1.64
RNF220Q5VTB9 AL158196.1-201ENST00000616786 434 ntBASIC4.82□□□□□ -1.64
RNF220Q5VTB9 AC118658.2-201ENST00000618697 459 ntBASIC4.82□□□□□ -1.64
RNF220Q5VTB9 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.82□□□□□ -1.64
RNF220Q5VTB9 AL356266.1-201ENST00000623311 483 ntBASIC4.82□□□□□ -1.64
RNF220Q5VTB9 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.82□□□□□ -1.64
RNF220Q5VTB9 AC022893.2-201ENST00000564832 3296 ntBASIC4.82□□□□□ -1.64
RNF220Q5VTB9 OR14L1P-202ENST00000641545 3009 ntBASIC4.82□□□□□ -1.64
RNF220Q5VTB9 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
RNF220Q5VTB9 AC091046.3-201ENST00000631455 1574 ntBASIC4.82□□□□□ -1.64
RNF220Q5VTB9 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RNF220Q5VTB9 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RNF220Q5VTB9 AC092747.4-201ENST00000620519 1861 ntBASIC4.81□□□□□ -1.64
RNF220Q5VTB9 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RNF220Q5VTB9 AC092435.4-201ENST00000623012 4159 ntBASIC4.81□□□□□ -1.64
RNF220Q5VTB9 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RNF220Q5VTB9 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RNF220Q5VTB9 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.81□□□□□ -1.64
RNF220Q5VTB9 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RNF220Q5VTB9 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RNF220Q5VTB9 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
RNF220Q5VTB9 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
RNF220Q5VTB9 RNVU1-3-201ENST00000364313 161 ntBASIC4.81□□□□□ -1.64
RNF220Q5VTB9 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RNF220Q5VTB9 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RNF220Q5VTB9 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
RNF220Q5VTB9 SNORA70E-201ENST00000384492 135 ntBASIC4.81□□□□□ -1.64
RNF220Q5VTB9 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
RNF220Q5VTB9 SNORA17A-201ENST00000391185 133 ntBASIC4.81□□□□□ -1.64
RNF220Q5VTB9 SNORA26.8-201ENST00000391306 124 ntBASIC4.81□□□□□ -1.64
RNF220Q5VTB9 AC007066.1-201ENST00000392902 381 ntBASIC4.81□□□□□ -1.64
RNF220Q5VTB9 OR8V1P-201ENST00000395193 873 ntBASIC4.81□□□□□ -1.64
RNF220Q5VTB9 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
RNF220Q5VTB9 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.81□□□□□ -1.64
RNF220Q5VTB9 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.81□□□□□ -1.64
RNF220Q5VTB9 AL390774.1-201ENST00000411924 246 ntBASIC4.81□□□□□ -1.64
RNF220Q5VTB9 AC009237.10-201ENST00000414112 510 ntBASIC4.81□□□□□ -1.64
RNF220Q5VTB9 TPMTP2-201ENST00000414372 726 ntBASIC4.81□□□□□ -1.64
RNF220Q5VTB9 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.81□□□□□ -1.64
RNF220Q5VTB9 MORF4L1P6-201ENST00000418771 268 ntBASIC4.81□□□□□ -1.64
RNF220Q5VTB9 FNDC3CP-201ENST00000420795 1155 ntBASIC4.81□□□□□ -1.64
RNF220Q5VTB9 AL133325.1-201ENST00000421090 382 ntBASIC4.81□□□□□ -1.64
RNF220Q5VTB9 AC012065.2-201ENST00000421295 375 ntBASIC4.81□□□□□ -1.64
RNF220Q5VTB9 AC009238.2-201ENST00000431026 355 ntBASIC4.81□□□□□ -1.64
RNF220Q5VTB9 Z80107.2-201ENST00000445127 392 ntBASIC4.81□□□□□ -1.64
RNF220Q5VTB9 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.81□□□□□ -1.64
RNF220Q5VTB9 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RNF220Q5VTB9 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.81□□□□□ -1.64
RNF220Q5VTB9 RPS4XP15-201ENST00000489210 795 ntBASIC4.81□□□□□ -1.64
RNF220Q5VTB9 AC080014.1-201ENST00000496877 1201 ntBASIC4.81□□□□□ -1.64
RNF220Q5VTB9 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.81□□□□□ -1.64
RNF220Q5VTB9 HIGD1AP10-201ENST00000527837 282 ntBASIC4.81□□□□□ -1.64
RNF220Q5VTB9 GSTP1P1-201ENST00000548078 319 ntBASIC4.81□□□□□ -1.64
RNF220Q5VTB9 AC126177.5-201ENST00000549599 178 ntBASIC4.81□□□□□ -1.64
RNF220Q5VTB9 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC4.81□□□□□ -1.64
RNF220Q5VTB9 MIR3614-201ENST00000581261 86 ntBASIC4.81□□□□□ -1.64
RNF220Q5VTB9 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.81□□□□□ -1.64
RNF220Q5VTB9 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.81□□□□□ -1.64
RNF220Q5VTB9 AC040904.1-201ENST00000590850 223 ntBASIC4.81□□□□□ -1.64
RNF220Q5VTB9 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RNF220Q5VTB9 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.81□□□□□ -1.64
RNF220Q5VTB9 AC105429.2-201ENST00000610567 517 ntBASIC4.81□□□□□ -1.64
RNF220Q5VTB9 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.81□□□□□ -1.64
RNF220Q5VTB9 AC009704.2-201ENST00000618739 483 ntBASIC4.81□□□□□ -1.64
RNF220Q5VTB9 AC005086.4-201ENST00000623065 213 ntBASIC4.81□□□□□ -1.64
RNF220Q5VTB9 SNORA17.5-201ENST00000630429 132 ntBASIC4.81□□□□□ -1.64
RNF220Q5VTB9 CASC19-222ENST00000641321 1173 ntBASIC4.81□□□□□ -1.64
RNF220Q5VTB9 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RNF220Q5VTB9 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC4.81□□□□□ -1.64
RNF220Q5VTB9 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RNF220Q5VTB9 CR383658.2-201ENST00000547576 1525 ntBASIC4.81□□□□□ -1.64
RNF220Q5VTB9 IRF5P1-201ENST00000504852 2164 ntBASIC4.81□□□□□ -1.64
RNF220Q5VTB9 AC008758.3-201ENST00000507003 1829 ntBASIC4.81□□□□□ -1.64
RNF220Q5VTB9 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.81□□□□□ -1.64
RNF220Q5VTB9 KPNA2P2-201ENST00000419546 1489 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 154.5 ms