Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
RIF1Q5UIP0 AC021755.1-201ENST00000559747 1447 ntBASIC3.23□□□□□ -1.89
RIF1Q5UIP0 AC062016.1-201ENST00000355719 319 ntBASIC3.23□□□□□ -1.89
RIF1Q5UIP0 U3.12-201ENST00000364498 214 ntBASIC3.23□□□□□ -1.89
RIF1Q5UIP0 VDAC2P1-201ENST00000399358 958 ntBASIC3.23□□□□□ -1.89
RIF1Q5UIP0 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.23□□□□□ -1.89
RIF1Q5UIP0 AC069285.2-201ENST00000440210 275 ntBASIC3.23□□□□□ -1.89
RIF1Q5UIP0 AC093156.1-201ENST00000440382 670 ntBASIC3.23□□□□□ -1.89
RIF1Q5UIP0 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.23□□□□□ -1.89
RIF1Q5UIP0 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC3.23□□□□□ -1.89
RIF1Q5UIP0 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.23□□□□□ -1.89
RIF1Q5UIP0 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.23□□□□□ -1.89
RIF1Q5UIP0 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RIF1Q5UIP0 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC3.23□□□□□ -1.89
RIF1Q5UIP0 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
RIF1Q5UIP0 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
RIF1Q5UIP0 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC3.23□□□□□ -1.89
RIF1Q5UIP0 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
RIF1Q5UIP0 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.23□□□□□ -1.89
RIF1Q5UIP0 AL391417.1-201ENST00000404100 426 ntBASIC3.22□□□□□ -1.89
RIF1Q5UIP0 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.22□□□□□ -1.89
RIF1Q5UIP0 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
RIF1Q5UIP0 CREM-238ENST00000488741 651 ntTSL 2 BASIC3.22□□□□□ -1.89
RIF1Q5UIP0 RN7SKP31-201ENST00000516354 278 ntBASIC3.22□□□□□ -1.89
RIF1Q5UIP0 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.22□□□□□ -1.89
RIF1Q5UIP0 AC234778.2-201ENST00000566241 354 ntBASIC3.22□□□□□ -1.89
RIF1Q5UIP0 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.22□□□□□ -1.89
RIF1Q5UIP0 AL133247.2-201ENST00000603236 482 ntBASIC3.22□□□□□ -1.89
RIF1Q5UIP0 RALGAPA1P1-201ENST00000443361 6232 ntBASIC3.22□□□□□ -1.89
RIF1Q5UIP0 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.22□□□□□ -1.89
RIF1Q5UIP0 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
RIF1Q5UIP0 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
RIF1Q5UIP0 SNORA67.4-201ENST00000384688 142 ntBASIC3.22□□□□□ -1.89
RIF1Q5UIP0 RPS29P31-201ENST00000446147 164 ntBASIC3.22□□□□□ -1.89
RIF1Q5UIP0 HMGB1P3-201ENST00000502802 616 ntBASIC3.22□□□□□ -1.89
RIF1Q5UIP0 FCF1P8-201ENST00000510322 597 ntBASIC3.22□□□□□ -1.89
RIF1Q5UIP0 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC3.22□□□□□ -1.89
RIF1Q5UIP0 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.22□□□□□ -1.89
RIF1Q5UIP0 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC3.22□□□□□ -1.89
RIF1Q5UIP0 AC027281.1-201ENST00000574178 758 ntBASIC3.22□□□□□ -1.89
RIF1Q5UIP0 AP000255.1-201ENST00000610276 676 ntBASIC3.22□□□□□ -1.89
RIF1Q5UIP0 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.22□□□□□ -1.89
RIF1Q5UIP0 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RIF1Q5UIP0 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
RIF1Q5UIP0 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RIF1Q5UIP0 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.22□□□□□ -1.89
RIF1Q5UIP0 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
RIF1Q5UIP0 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
RIF1Q5UIP0 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.21□□□□□ -1.89
RIF1Q5UIP0 RN7SKP220-201ENST00000410611 288 ntBASIC3.21□□□□□ -1.89
RIF1Q5UIP0 OR51A6P-201ENST00000418680 1004 ntBASIC3.21□□□□□ -1.89
RIF1Q5UIP0 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.21□□□□□ -1.89
RIF1Q5UIP0 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC3.21□□□□□ -1.89
RIF1Q5UIP0 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.21□□□□□ -1.89
RIF1Q5UIP0 HMGN2P7-201ENST00000456186 273 ntBASIC3.21□□□□□ -1.89
RIF1Q5UIP0 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.89
RIF1Q5UIP0 NPM1P5-201ENST00000557228 838 ntBASIC3.21□□□□□ -1.89
RIF1Q5UIP0 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.21□□□□□ -1.89
RIF1Q5UIP0 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.89
RIF1Q5UIP0 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.21□□□□□ -1.89
RIF1Q5UIP0 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.89
RIF1Q5UIP0 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.89
RIF1Q5UIP0 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
RIF1Q5UIP0 AC104446.1-201ENST00000613728 1321 ntBASIC3.21□□□□□ -1.9
RIF1Q5UIP0 LINC01355-201ENST00000566551 5444 ntBASIC3.21□□□□□ -1.9
RIF1Q5UIP0 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.21□□□□□ -1.9
RIF1Q5UIP0 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
RIF1Q5UIP0 KCTD9P3-201ENST00000434597 1169 ntBASIC3.21□□□□□ -1.9
RIF1Q5UIP0 GEMIN8P3-201ENST00000445417 720 ntBASIC3.21□□□□□ -1.9
RIF1Q5UIP0 snoU13.23-201ENST00000458863 104 ntBASIC3.21□□□□□ -1.9
RIF1Q5UIP0 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.21□□□□□ -1.9
RIF1Q5UIP0 RNU4-29P-201ENST00000515943 174 ntBASIC3.21□□□□□ -1.9
RIF1Q5UIP0 AC019227.1-201ENST00000526902 510 ntBASIC3.21□□□□□ -1.9
RIF1Q5UIP0 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
RIF1Q5UIP0 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.21□□□□□ -1.9
RIF1Q5UIP0 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.21□□□□□ -1.9
RIF1Q5UIP0 AC063979.1-201ENST00000415539 377 ntBASIC3.2□□□□□ -1.9
RIF1Q5UIP0 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.2□□□□□ -1.9
RIF1Q5UIP0 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.2□□□□□ -1.9
RIF1Q5UIP0 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC3.2□□□□□ -1.9
RIF1Q5UIP0 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC3.2□□□□□ -1.9
RIF1Q5UIP0 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC3.2□□□□□ -1.9
RIF1Q5UIP0 AC087888.1-201ENST00000550884 1254 ntBASIC3.2□□□□□ -1.9
RIF1Q5UIP0 RN7SL371P-201ENST00000578099 267 ntBASIC3.2□□□□□ -1.9
RIF1Q5UIP0 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC3.2□□□□□ -1.9
RIF1Q5UIP0 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
RIF1Q5UIP0 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RIF1Q5UIP0 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.2□□□□□ -1.9
RIF1Q5UIP0 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RIF1Q5UIP0 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RIF1Q5UIP0 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.2□□□□□ -1.9
RIF1Q5UIP0 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
RIF1Q5UIP0 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.2□□□□□ -1.9
RIF1Q5UIP0 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.2□□□□□ -1.9
RIF1Q5UIP0 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RIF1Q5UIP0 FCF1P3-201ENST00000496394 590 ntBASIC3.2□□□□□ -1.9
RIF1Q5UIP0 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.2□□□□□ -1.9
RIF1Q5UIP0 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.2□□□□□ -1.9
RIF1Q5UIP0 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.2□□□□□ -1.9
RIF1Q5UIP0 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms