Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
RC3H1Q5TC82 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
RC3H1Q5TC82 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC7.28□□□□□ -1.24
RC3H1Q5TC82 AC003985.2-201ENST00000562268 1669 ntBASIC7.28□□□□□ -1.24
RC3H1Q5TC82 AC023421.1-201ENST00000590535 1785 ntBASIC7.28□□□□□ -1.24
RC3H1Q5TC82 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RC3H1Q5TC82 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC7.28□□□□□ -1.24
RC3H1Q5TC82 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RC3H1Q5TC82 IMMTP1-201ENST00000435590 2219 ntBASIC7.28□□□□□ -1.24
RC3H1Q5TC82 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
RC3H1Q5TC82 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC7.28□□□□□ -1.24
RC3H1Q5TC82 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC7.28□□□□□ -1.24
RC3H1Q5TC82 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RC3H1Q5TC82 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
RC3H1Q5TC82 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
RC3H1Q5TC82 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RC3H1Q5TC82 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC7.28□□□□□ -1.24
RC3H1Q5TC82 AP000547.3-204ENST00000588548 2523 ntBASIC7.28□□□□□ -1.24
RC3H1Q5TC82 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC7.28□□□□□ -1.24
RC3H1Q5TC82 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RC3H1Q5TC82 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RC3H1Q5TC82 AL157777.2-201ENST00000258070 137 ntBASIC7.28□□□□□ -1.24
RC3H1Q5TC82 RNU6-582P-201ENST00000362989 107 ntBASIC7.28□□□□□ -1.24
RC3H1Q5TC82 Y_RNA.307-201ENST00000365022 117 ntBASIC7.28□□□□□ -1.24
RC3H1Q5TC82 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
RC3H1Q5TC82 RNU6-1062P-201ENST00000383908 107 ntBASIC7.28□□□□□ -1.24
RC3H1Q5TC82 MIR550A3-201ENST00000390735 95 ntBASIC7.28□□□□□ -1.24
RC3H1Q5TC82 AL121834.1-202ENST00000404494 277 ntBASIC7.28□□□□□ -1.24
RC3H1Q5TC82 RNU6ATAC18P-201ENST00000408413 101 ntBASIC7.28□□□□□ -1.24
RC3H1Q5TC82 RNU4-14P-201ENST00000410858 122 ntBASIC7.28□□□□□ -1.24
RC3H1Q5TC82 MTND4LP17-201ENST00000414607 293 ntBASIC7.28□□□□□ -1.24
RC3H1Q5TC82 AC114814.2-201ENST00000419195 485 ntBASIC7.28□□□□□ -1.24
RC3H1Q5TC82 HSPE1P1-201ENST00000421494 318 ntBASIC7.28□□□□□ -1.24
RC3H1Q5TC82 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC7.28□□□□□ -1.24
RC3H1Q5TC82 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC7.28□□□□□ -1.24
RC3H1Q5TC82 H2AFZP6-201ENST00000444403 394 ntBASIC7.28□□□□□ -1.24
RC3H1Q5TC82 AL136380.1-201ENST00000447970 162 ntBASIC7.28□□□□□ -1.24
RC3H1Q5TC82 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC7.28□□□□□ -1.24
RC3H1Q5TC82 AC007547.1-201ENST00000462177 490 ntBASIC7.28□□□□□ -1.24
RC3H1Q5TC82 RPL7AP6-201ENST00000477943 801 ntBASIC7.28□□□□□ -1.24
RC3H1Q5TC82 RPSAP50-201ENST00000481955 852 ntBASIC7.28□□□□□ -1.24
RC3H1Q5TC82 AC025164.1-201ENST00000496249 478 ntBASIC7.28□□□□□ -1.24
RC3H1Q5TC82 NDUFB5P1-201ENST00000508134 564 ntBASIC7.28□□□□□ -1.24
RC3H1Q5TC82 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
RC3H1Q5TC82 PTP4A1P6-201ENST00000531034 478 ntBASIC7.28□□□□□ -1.24
RC3H1Q5TC82 OR5D15P-201ENST00000531671 942 ntBASIC7.28□□□□□ -1.24
RC3H1Q5TC82 BNIP3P6-201ENST00000549284 499 ntBASIC7.28□□□□□ -1.24
RC3H1Q5TC82 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC7.28□□□□□ -1.24
RC3H1Q5TC82 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC7.28□□□□□ -1.24
RC3H1Q5TC82 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC7.28□□□□□ -1.24
RC3H1Q5TC82 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC7.28□□□□□ -1.24
RC3H1Q5TC82 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC7.28□□□□□ -1.24
RC3H1Q5TC82 APOOP1-201ENST00000604695 592 ntBASIC7.28□□□□□ -1.24
RC3H1Q5TC82 AC022893.3-201ENST00000607665 437 ntBASIC7.28□□□□□ -1.24
RC3H1Q5TC82 CCL14-204ENST00000622526 472 ntTSL 3 BASIC7.28□□□□□ -1.24
RC3H1Q5TC82 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC7.28□□□□□ -1.24
RC3H1Q5TC82 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RC3H1Q5TC82 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
RC3H1Q5TC82 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
RC3H1Q5TC82 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RC3H1Q5TC82 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
RC3H1Q5TC82 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC7.28□□□□□ -1.24
RC3H1Q5TC82 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RC3H1Q5TC82 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC7.28□□□□□ -1.24
RC3H1Q5TC82 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
RC3H1Q5TC82 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RC3H1Q5TC82 AC090337.1-201ENST00000579651 2074 ntBASIC7.28□□□□□ -1.24
RC3H1Q5TC82 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
RC3H1Q5TC82 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC7.27□□□□□ -1.24
RC3H1Q5TC82 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC7.27□□□□□ -1.24
RC3H1Q5TC82 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
RC3H1Q5TC82 DOCK11P1-201ENST00000553480 5932 ntBASIC7.27□□□□□ -1.25
RC3H1Q5TC82 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC7.27□□□□□ -1.25
RC3H1Q5TC82 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC7.27□□□□□ -1.25
RC3H1Q5TC82 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
RC3H1Q5TC82 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
RC3H1Q5TC82 POT1-202ENST00000393329 3950 ntTSL 5 BASIC7.27□□□□□ -1.25
RC3H1Q5TC82 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
RC3H1Q5TC82 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC7.27□□□□□ -1.25
RC3H1Q5TC82 Y_RNA.135-201ENST00000363439 95 ntBASIC7.27□□□□□ -1.25
RC3H1Q5TC82 SNORD8-201ENST00000363915 110 ntBASIC7.27□□□□□ -1.25
RC3H1Q5TC82 MIR320C1-201ENST00000408566 88 ntBASIC7.27□□□□□ -1.25
RC3H1Q5TC82 HMGB3P2-201ENST00000411913 584 ntBASIC7.27□□□□□ -1.25
RC3H1Q5TC82 AC234782.4-201ENST00000417646 1048 ntBASIC7.27□□□□□ -1.25
RC3H1Q5TC82 AL590762.4-201ENST00000425885 253 ntBASIC7.27□□□□□ -1.25
RC3H1Q5TC82 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC7.27□□□□□ -1.25
RC3H1Q5TC82 HMGB3P22-202ENST00000451823 572 ntBASIC7.27□□□□□ -1.25
RC3H1Q5TC82 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
RC3H1Q5TC82 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC7.27□□□□□ -1.25
RC3H1Q5TC82 RNU6-150P-201ENST00000516237 95 ntBASIC7.27□□□□□ -1.25
RC3H1Q5TC82 RNU6-764P-201ENST00000516396 105 ntBASIC7.27□□□□□ -1.25
RC3H1Q5TC82 RNU6-1004P-201ENST00000516584 111 ntBASIC7.27□□□□□ -1.25
RC3H1Q5TC82 RN7SKP98-201ENST00000517070 156 ntBASIC7.27□□□□□ -1.25
RC3H1Q5TC82 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC7.27□□□□□ -1.25
RC3H1Q5TC82 SUB1P1-201ENST00000524415 382 ntBASIC7.27□□□□□ -1.25
RC3H1Q5TC82 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
RC3H1Q5TC82 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
RC3H1Q5TC82 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC7.27□□□□□ -1.25
RC3H1Q5TC82 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC7.27□□□□□ -1.25
RC3H1Q5TC82 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC7.27□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms