Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 RNY4P34-201ENST00000364779 95 ntBASIC6.17□□□□□ -1.42
USP11P51784 RNU6-533P-201ENST00000384144 107 ntBASIC6.17□□□□□ -1.42
USP11P51784 RNU6-738P-201ENST00000384531 106 ntBASIC6.17□□□□□ -1.42
USP11P51784 AL049693.1-201ENST00000402760 611 ntBASIC6.17□□□□□ -1.42
USP11P51784 AL139128.1-201ENST00000413921 941 ntBASIC6.17□□□□□ -1.42
USP11P51784 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC6.17□□□□□ -1.42
USP11P51784 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC6.17□□□□□ -1.42
USP11P51784 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC6.17□□□□□ -1.42
USP11P51784 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC6.17□□□□□ -1.42
USP11P51784 AL035410.1-201ENST00000427409 427 ntBASIC6.17□□□□□ -1.42
USP11P51784 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC6.17□□□□□ -1.42
USP11P51784 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.17□□□□□ -1.42
USP11P51784 SAR1AP4-201ENST00000429225 591 ntBASIC6.17□□□□□ -1.42
USP11P51784 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC6.17□□□□□ -1.42
USP11P51784 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC6.17□□□□□ -1.42
USP11P51784 FTLP19-201ENST00000433300 394 ntBASIC6.17□□□□□ -1.42
USP11P51784 CALM1P1-201ENST00000442082 433 ntBASIC6.17□□□□□ -1.42
USP11P51784 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC6.17□□□□□ -1.42
USP11P51784 AC233279.1-201ENST00000455300 423 ntBASIC6.17□□□□□ -1.42
USP11P51784 C1DP4-201ENST00000455429 424 ntBASIC6.17□□□□□ -1.42
USP11P51784 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC6.17□□□□□ -1.42
USP11P51784 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC6.17□□□□□ -1.42
USP11P51784 RN7SL447P-201ENST00000494711 245 ntBASIC6.17□□□□□ -1.42
USP11P51784 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC6.17□□□□□ -1.42
USP11P51784 RNU6-1261P-201ENST00000517194 104 ntBASIC6.17□□□□□ -1.42
USP11P51784 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC6.17□□□□□ -1.42
USP11P51784 DEFB131D-201ENST00000526803 184 ntBASIC6.17□□□□□ -1.42
USP11P51784 SLC2A13P1-201ENST00000531560 322 ntBASIC6.17□□□□□ -1.42
USP11P51784 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC6.17□□□□□ -1.42
USP11P51784 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC6.17□□□□□ -1.42
USP11P51784 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC6.17□□□□□ -1.42
USP11P51784 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.17□□□□□ -1.42
USP11P51784 SNORD39.2-201ENST00000579995 76 ntBASIC6.17□□□□□ -1.42
USP11P51784 AC011712.1-201ENST00000588959 234 ntBASIC6.17□□□□□ -1.42
USP11P51784 VN1R80P-201ENST00000597126 338 ntBASIC6.17□□□□□ -1.42
USP11P51784 AL133255.1-201ENST00000606374 441 ntBASIC6.17□□□□□ -1.42
USP11P51784 RMST_3.1-201ENST00000611651 109 ntBASIC6.17□□□□□ -1.42
USP11P51784 AC040896.1-201ENST00000613819 479 ntBASIC6.17□□□□□ -1.42
USP11P51784 MIR6837-201ENST00000620884 64 ntBASIC6.17□□□□□ -1.42
USP11P51784 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
USP11P51784 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
USP11P51784 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.17□□□□□ -1.42
USP11P51784 AC007342.5-201ENST00000571340 2142 ntBASIC6.17□□□□□ -1.42
USP11P51784 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
USP11P51784 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.17□□□□□ -1.42
USP11P51784 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.17□□□□□ -1.42
USP11P51784 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
USP11P51784 CCT8P1-201ENST00000413611 1657 ntBASIC6.17□□□□□ -1.42
USP11P51784 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USP11P51784 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.16□□□□□ -1.42
USP11P51784 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USP11P51784 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USP11P51784 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.16□□□□□ -1.42
USP11P51784 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USP11P51784 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USP11P51784 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC6.16□□□□□ -1.42
USP11P51784 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USP11P51784 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
USP11P51784 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
USP11P51784 AC004656.1-201ENST00000568479 4951 ntBASIC6.16□□□□□ -1.42
USP11P51784 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
USP11P51784 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.16□□□□□ -1.42
USP11P51784 MIR133B-201ENST00000362210 119 ntBASIC6.16□□□□□ -1.42
USP11P51784 CUBN-201ENST00000377823 705 ntTSL 3 BASIC6.16□□□□□ -1.42
USP11P51784 SNORD56.6-201ENST00000384569 71 ntBASIC6.16□□□□□ -1.42
USP11P51784 DBIP1-201ENST00000401435 260 ntBASIC6.16□□□□□ -1.42
USP11P51784 Y_RNA.608-201ENST00000410647 95 ntBASIC6.16□□□□□ -1.42
USP11P51784 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC6.16□□□□□ -1.42
USP11P51784 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
USP11P51784 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC6.16□□□□□ -1.42
USP11P51784 AC016769.2-201ENST00000414815 475 ntBASIC6.16□□□□□ -1.42
USP11P51784 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC6.16□□□□□ -1.42
USP11P51784 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC6.16□□□□□ -1.42
USP11P51784 SNRPEP10-201ENST00000420249 274 ntBASIC6.16□□□□□ -1.42
USP11P51784 PIGFP2-201ENST00000421400 651 ntBASIC6.16□□□□□ -1.42
USP11P51784 AC018644.1-201ENST00000429934 551 ntBASIC6.16□□□□□ -1.42
USP11P51784 CFL1P1-202ENST00000432948 411 ntBASIC6.16□□□□□ -1.42
USP11P51784 GSTM5P1-201ENST00000434751 660 ntBASIC6.16□□□□□ -1.42
USP11P51784 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC6.16□□□□□ -1.42
USP11P51784 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC6.16□□□□□ -1.42
USP11P51784 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.16□□□□□ -1.42
USP11P51784 GAPDHP25-201ENST00000447061 1001 ntBASIC6.16□□□□□ -1.42
USP11P51784 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC6.16□□□□□ -1.42
USP11P51784 ARPC3P5-201ENST00000448802 534 ntBASIC6.16□□□□□ -1.42
USP11P51784 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC6.16□□□□□ -1.42
USP11P51784 AC011225.1-201ENST00000457751 369 ntBASIC6.16□□□□□ -1.42
USP11P51784 AC021660.1-201ENST00000465006 554 ntBASIC6.16□□□□□ -1.42
USP11P51784 RN7SL177P-201ENST00000476596 299 ntBASIC6.16□□□□□ -1.42
USP11P51784 RPL35P6-201ENST00000490024 372 ntBASIC6.16□□□□□ -1.42
USP11P51784 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC6.16□□□□□ -1.42
USP11P51784 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC6.16□□□□□ -1.42
USP11P51784 SCARNA20.4-201ENST00000516969 131 ntBASIC6.16□□□□□ -1.42
USP11P51784 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC6.16□□□□□ -1.42
USP11P51784 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC6.16□□□□□ -1.42
USP11P51784 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC6.16□□□□□ -1.42
USP11P51784 IGHVIII-67-4-201ENST00000524281 296 ntBASIC6.16□□□□□ -1.42
USP11P51784 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC6.16□□□□□ -1.42
USP11P51784 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC6.16□□□□□ -1.42
USP11P51784 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC6.16□□□□□ -1.42
USP11P51784 AC126177.5-201ENST00000549599 178 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms