Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4□□□□□ -1.77
CASQ1P31415 AC011602.1-201ENST00000546484 331 ntBASIC4□□□□□ -1.77
CASQ1P31415 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4□□□□□ -1.77
CASQ1P31415 OR4T1P-201ENST00000554933 911 ntBASIC4□□□□□ -1.77
CASQ1P31415 AC006960.3-201ENST00000561845 705 ntBASIC4□□□□□ -1.77
CASQ1P31415 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4□□□□□ -1.77
CASQ1P31415 AC016877.3-201ENST00000606778 504 ntBASIC4□□□□□ -1.77
CASQ1P31415 AL354760.1-201ENST00000608357 643 ntBASIC4□□□□□ -1.77
CASQ1P31415 MIR7155-201ENST00000615925 56 ntBASIC4□□□□□ -1.77
CASQ1P31415 U6.48-201ENST00000618523 106 ntBASIC4□□□□□ -1.77
CASQ1P31415 AC073530.2-201ENST00000623987 261 ntBASIC4□□□□□ -1.77
CASQ1P31415 AC011944.2-201ENST00000624440 683 ntBASIC4□□□□□ -1.77
CASQ1P31415 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4□□□□□ -1.77
CASQ1P31415 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
CASQ1P31415 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.99□□□□□ -1.77
CASQ1P31415 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CASQ1P31415 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC3.99□□□□□ -1.77
CASQ1P31415 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.99□□□□□ -1.77
CASQ1P31415 SNORA51.1-201ENST00000363243 140 ntBASIC3.99□□□□□ -1.77
CASQ1P31415 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.99□□□□□ -1.77
CASQ1P31415 RNU2-21P-201ENST00000410368 188 ntBASIC3.99□□□□□ -1.77
CASQ1P31415 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CASQ1P31415 AL590139.1-201ENST00000416267 400 ntBASIC3.99□□□□□ -1.77
CASQ1P31415 HMGB3P20-201ENST00000417997 600 ntBASIC3.99□□□□□ -1.77
CASQ1P31415 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.99□□□□□ -1.77
CASQ1P31415 AJ239321.1-201ENST00000424255 564 ntBASIC3.99□□□□□ -1.77
CASQ1P31415 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC3.99□□□□□ -1.77
CASQ1P31415 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.99□□□□□ -1.77
CASQ1P31415 RPL7P52-201ENST00000449200 742 ntBASIC3.99□□□□□ -1.77
CASQ1P31415 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.99□□□□□ -1.77
CASQ1P31415 RPS27P29-201ENST00000463110 252 ntBASIC3.99□□□□□ -1.77
CASQ1P31415 CYCSP20-201ENST00000473154 315 ntBASIC3.99□□□□□ -1.77
CASQ1P31415 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC3.99□□□□□ -1.77
CASQ1P31415 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.99□□□□□ -1.77
CASQ1P31415 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.99□□□□□ -1.77
CASQ1P31415 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CASQ1P31415 AC006116.5-201ENST00000591936 559 ntBASIC3.99□□□□□ -1.77
CASQ1P31415 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC3.99□□□□□ -1.77
CASQ1P31415 AL163642.2-201ENST00000604722 1019 ntBASIC3.99□□□□□ -1.77
CASQ1P31415 AC135803.1-201ENST00000608748 565 ntBASIC3.99□□□□□ -1.77
CASQ1P31415 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.99□□□□□ -1.77
CASQ1P31415 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.99□□□□□ -1.77
CASQ1P31415 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CASQ1P31415 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CASQ1P31415 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CASQ1P31415 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CASQ1P31415 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.98□□□□□ -1.77
CASQ1P31415 AL079305.1-201ENST00000623159 3008 ntBASIC3.98□□□□□ -1.77
CASQ1P31415 CR788268.1-201ENST00000603931 1809 ntBASIC3.98□□□□□ -1.77
CASQ1P31415 RARSP1-201ENST00000542842 1418 ntBASIC3.98□□□□□ -1.77
CASQ1P31415 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CASQ1P31415 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CASQ1P31415 MIR383-201ENST00000362257 73 ntBASIC3.98□□□□□ -1.77
CASQ1P31415 RNA5SP447-201ENST00000363749 119 ntBASIC3.98□□□□□ -1.77
CASQ1P31415 RNU6-335P-201ENST00000364563 113 ntBASIC3.98□□□□□ -1.77
CASQ1P31415 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CASQ1P31415 RPS16P5-201ENST00000406501 404 ntBASIC3.98□□□□□ -1.77
CASQ1P31415 Z97055.1-201ENST00000419730 712 ntBASIC3.98□□□□□ -1.77
CASQ1P31415 RPL17P36-201ENST00000420302 549 ntBASIC3.98□□□□□ -1.77
CASQ1P31415 OR4F13P-201ENST00000428478 931 ntBASIC3.98□□□□□ -1.77
CASQ1P31415 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.98□□□□□ -1.77
CASQ1P31415 Z74696.2-201ENST00000436514 498 ntBASIC3.98□□□□□ -1.77
CASQ1P31415 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.98□□□□□ -1.77
CASQ1P31415 AC074367.1-201ENST00000438685 1125 ntBASIC3.98□□□□□ -1.77
CASQ1P31415 TXNP2-201ENST00000443918 295 ntBASIC3.98□□□□□ -1.77
CASQ1P31415 TPTE2P6-202ENST00000445572 1007 ntBASIC3.98□□□□□ -1.77
CASQ1P31415 RPL34P26-201ENST00000445636 354 ntBASIC3.98□□□□□ -1.77
CASQ1P31415 Z95152.1-201ENST00000453556 656 ntBASIC3.98□□□□□ -1.77
CASQ1P31415 AC099563.1-201ENST00000456086 418 ntBASIC3.98□□□□□ -1.77
CASQ1P31415 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
CASQ1P31415 RPS23P7-201ENST00000466210 444 ntBASIC3.98□□□□□ -1.77
CASQ1P31415 AL161747.1-201ENST00000480068 358 ntBASIC3.98□□□□□ -1.77
CASQ1P31415 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.98□□□□□ -1.77
CASQ1P31415 RPS27AP13-201ENST00000498403 237 ntBASIC3.98□□□□□ -1.77
CASQ1P31415 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.98□□□□□ -1.77
CASQ1P31415 AC110768.1-201ENST00000509222 400 ntBASIC3.98□□□□□ -1.77
CASQ1P31415 TXNP6-201ENST00000510190 310 ntBASIC3.98□□□□□ -1.77
CASQ1P31415 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC3.98□□□□□ -1.77
CASQ1P31415 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.98□□□□□ -1.77
CASQ1P31415 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.98□□□□□ -1.77
CASQ1P31415 MTND2P26-201ENST00000528255 1029 ntBASIC3.98□□□□□ -1.77
CASQ1P31415 AL121766.1-201ENST00000547436 487 ntBASIC3.98□□□□□ -1.77
CASQ1P31415 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.98□□□□□ -1.77
CASQ1P31415 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.98□□□□□ -1.77
CASQ1P31415 AL049874.4-201ENST00000557593 255 ntBASIC3.98□□□□□ -1.77
CASQ1P31415 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.98□□□□□ -1.77
CASQ1P31415 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC3.98□□□□□ -1.77
CASQ1P31415 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.98□□□□□ -1.77
CASQ1P31415 NF1P10-201ENST00000613227 742 ntBASIC3.98□□□□□ -1.77
CASQ1P31415 MIR6886-201ENST00000619864 61 ntBASIC3.98□□□□□ -1.77
CASQ1P31415 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CASQ1P31415 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CASQ1P31415 CDRT1-208ENST00000630868 794 ntBASIC3.98□□□□□ -1.77
CASQ1P31415 AL732372.2-225ENST00000642124 456 ntBASIC3.98□□□□□ -1.77
CASQ1P31415 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CASQ1P31415 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CASQ1P31415 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.98□□□□□ -1.77
CASQ1P31415 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
CASQ1P31415 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CASQ1P31415 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms