Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
COL9A1P20849 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC7.02□□□□□ -1.29
COL9A1P20849 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC7.02□□□□□ -1.29
COL9A1P20849 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
COL9A1P20849 RPS26P56-201ENST00000444468 240 ntBASIC7.02□□□□□ -1.29
COL9A1P20849 RPS3AP46-201ENST00000448352 682 ntBASIC7.02□□□□□ -1.29
COL9A1P20849 RPL29P29-201ENST00000448725 423 ntBASIC7.02□□□□□ -1.29
COL9A1P20849 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC7.02□□□□□ -1.29
COL9A1P20849 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC7.02□□□□□ -1.29
COL9A1P20849 AC084198.1-201ENST00000477747 402 ntBASIC7.02□□□□□ -1.29
COL9A1P20849 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC7.02□□□□□ -1.29
COL9A1P20849 AC108471.1-201ENST00000513977 287 ntBASIC7.02□□□□□ -1.29
COL9A1P20849 AC027801.3-201ENST00000515049 698 ntBASIC7.02□□□□□ -1.29
COL9A1P20849 RNU2-69P-201ENST00000516061 100 ntBASIC7.02□□□□□ -1.29
COL9A1P20849 RNA5SP228-201ENST00000516232 133 ntBASIC7.02□□□□□ -1.29
COL9A1P20849 AP006587.4-201ENST00000526053 529 ntBASIC7.02□□□□□ -1.29
COL9A1P20849 SAA3P-201ENST00000533267 365 ntBASIC7.02□□□□□ -1.29
COL9A1P20849 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC7.02□□□□□ -1.29
COL9A1P20849 AC007537.1-201ENST00000539347 327 ntBASIC7.02□□□□□ -1.29
COL9A1P20849 AL133153.1-201ENST00000557756 303 ntBASIC7.02□□□□□ -1.29
COL9A1P20849 ZNF207-207ENST00000577908 4672 ntAPPRIS ALT1 TSL 5 BASIC7.02□□□□□ -1.29
COL9A1P20849 AC115085.1-201ENST00000588924 229 ntBASIC7.02□□□□□ -1.29
COL9A1P20849 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC7.02□□□□□ -1.29
COL9A1P20849 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC7.02□□□□□ -1.29
COL9A1P20849 PSMA6P4-201ENST00000603247 718 ntBASIC7.02□□□□□ -1.29
COL9A1P20849 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC7.02□□□□□ -1.29
COL9A1P20849 RNU6-84P-201ENST00000607737 102 ntBASIC7.02□□□□□ -1.29
COL9A1P20849 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC7.02□□□□□ -1.29
COL9A1P20849 AP000550.3-201ENST00000637734 379 ntBASIC7.02□□□□□ -1.29
COL9A1P20849 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC7.02□□□□□ -1.29
COL9A1P20849 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
COL9A1P20849 EIF2AP4-201ENST00000424793 1781 ntBASIC7.02□□□□□ -1.29
COL9A1P20849 AC009690.2-201ENST00000570175 3148 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
COL9A1P20849 PABPC5-201ENST00000312600 3221 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
COL9A1P20849 EXOC5P1-201ENST00000510543 1969 ntBASIC7.02□□□□□ -1.29
COL9A1P20849 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
COL9A1P20849 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
COL9A1P20849 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
COL9A1P20849 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
COL9A1P20849 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC7.02□□□□□ -1.29
COL9A1P20849 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC7.02□□□□□ -1.29
COL9A1P20849 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
COL9A1P20849 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
COL9A1P20849 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
COL9A1P20849 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC7.01□□□□□ -1.29
COL9A1P20849 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
COL9A1P20849 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
COL9A1P20849 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
COL9A1P20849 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
COL9A1P20849 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
COL9A1P20849 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
COL9A1P20849 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC7.01□□□□□ -1.29
COL9A1P20849 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC7.01□□□□□ -1.29
COL9A1P20849 CUZD1-206ENST00000392790 2279 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
COL9A1P20849 THSD4-AS1-202ENST00000562634 2182 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
COL9A1P20849 TMEM75-201ENST00000624314 2165 ntBASIC7.01□□□□□ -1.29
COL9A1P20849 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC7.01□□□□□ -1.29
COL9A1P20849 AC008676.2-202ENST00000509655 1992 ntTSL 2 BASIC7.01□□□□□ -1.29
COL9A1P20849 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
COL9A1P20849 MIR517A-201ENST00000385001 87 ntBASIC7.01□□□□□ -1.29
COL9A1P20849 RNU6-493P-201ENST00000391321 108 ntBASIC7.01□□□□□ -1.29
COL9A1P20849 AL157702.1-201ENST00000398764 426 ntBASIC7.01□□□□□ -1.29
COL9A1P20849 RPS3AP2-201ENST00000407190 754 ntBASIC7.01□□□□□ -1.29
COL9A1P20849 RNU2-51P-201ENST00000410708 197 ntBASIC7.01□□□□□ -1.29
COL9A1P20849 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC7.01□□□□□ -1.29
COL9A1P20849 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC7.01□□□□□ -1.29
COL9A1P20849 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
COL9A1P20849 PSMA2P3-201ENST00000429685 675 ntBASIC7.01□□□□□ -1.29
COL9A1P20849 AL445305.1-201ENST00000432577 575 ntBASIC7.01□□□□□ -1.29
COL9A1P20849 RPL35AP22-201ENST00000436855 335 ntBASIC7.01□□□□□ -1.29
COL9A1P20849 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC7.01□□□□□ -1.29
COL9A1P20849 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC7.01□□□□□ -1.29
COL9A1P20849 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC7.01□□□□□ -1.29
COL9A1P20849 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC7.01□□□□□ -1.29
COL9A1P20849 SNORD121B-201ENST00000458838 81 ntBASIC7.01□□□□□ -1.29
COL9A1P20849 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC7.01□□□□□ -1.29
COL9A1P20849 RN7SL379P-201ENST00000479912 293 ntBASIC7.01□□□□□ -1.29
COL9A1P20849 RPS23P5-201ENST00000495419 428 ntBASIC7.01□□□□□ -1.29
COL9A1P20849 AC146944.3-201ENST00000509969 371 ntBASIC7.01□□□□□ -1.29
COL9A1P20849 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC7.01□□□□□ -1.29
COL9A1P20849 AC087441.2-201ENST00000529141 262 ntBASIC7.01□□□□□ -1.29
COL9A1P20849 RPL10P14-201ENST00000565265 298 ntBASIC7.01□□□□□ -1.29
COL9A1P20849 ACTG1P15-201ENST00000570019 1063 ntBASIC7.01□□□□□ -1.29
COL9A1P20849 AL451044.1-201ENST00000604867 238 ntBASIC7.01□□□□□ -1.29
COL9A1P20849 AC023813.4-201ENST00000607580 580 ntBASIC7.01□□□□□ -1.29
COL9A1P20849 AL352984.2-201ENST00000611153 546 ntBASIC7.01□□□□□ -1.29
COL9A1P20849 MIR6820-201ENST00000611508 62 ntBASIC7.01□□□□□ -1.29
COL9A1P20849 U1.34-201ENST00000618578 162 ntBASIC7.01□□□□□ -1.29
COL9A1P20849 U1.31-201ENST00000620022 160 ntBASIC7.01□□□□□ -1.29
COL9A1P20849 AL136313.1-201ENST00000624804 202 ntBASIC7.01□□□□□ -1.29
COL9A1P20849 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
COL9A1P20849 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
COL9A1P20849 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
COL9A1P20849 SLC9A6-213ENST00000637234 4691 ntTSL 5 BASIC7.01□□□□□ -1.29
COL9A1P20849 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
COL9A1P20849 WBP11P1-201ENST00000562560 1931 ntBASIC7.01□□□□□ -1.29
COL9A1P20849 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC7.01□□□□□ -1.29
COL9A1P20849 ERVFRD-3-201ENST00000578561 1617 ntBASIC7.01□□□□□ -1.29
COL9A1P20849 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
COL9A1P20849 AC009108.3-201ENST00000602739 3515 ntBASIC7.01□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms