Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 AC138915.3-201ENST00000562908 1389 ntBASIC3.6□□□□□ -1.83
SEMA3DO95025 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SEMA3DO95025 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SEMA3DO95025 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SEMA3DO95025 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SEMA3DO95025 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.6□□□□□ -1.83
SEMA3DO95025 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
SEMA3DO95025 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SEMA3DO95025 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
SEMA3DO95025 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.59□□□□□ -1.83
SEMA3DO95025 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SEMA3DO95025 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SEMA3DO95025 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
SEMA3DO95025 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.59□□□□□ -1.83
SEMA3DO95025 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.59□□□□□ -1.83
SEMA3DO95025 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.59□□□□□ -1.83
SEMA3DO95025 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC3.59□□□□□ -1.83
SEMA3DO95025 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.59□□□□□ -1.83
SEMA3DO95025 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SEMA3DO95025 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.59□□□□□ -1.83
SEMA3DO95025 AC004975.1-201ENST00000428733 208 ntBASIC3.59□□□□□ -1.83
SEMA3DO95025 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.59□□□□□ -1.83
SEMA3DO95025 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.59□□□□□ -1.83
SEMA3DO95025 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.59□□□□□ -1.83
SEMA3DO95025 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.59□□□□□ -1.83
SEMA3DO95025 AP002345.1-201ENST00000456493 928 ntBASIC3.59□□□□□ -1.83
SEMA3DO95025 RNU6-775P-201ENST00000459318 96 ntBASIC3.59□□□□□ -1.83
SEMA3DO95025 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.59□□□□□ -1.83
SEMA3DO95025 RPL21P103-201ENST00000479921 488 ntBASIC3.59□□□□□ -1.83
SEMA3DO95025 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3.59□□□□□ -1.83
SEMA3DO95025 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.59□□□□□ -1.83
SEMA3DO95025 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.59□□□□□ -1.83
SEMA3DO95025 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.59□□□□□ -1.83
SEMA3DO95025 OR5H4P-201ENST00000510851 923 ntBASIC3.59□□□□□ -1.83
SEMA3DO95025 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC3.59□□□□□ -1.83
SEMA3DO95025 RNU6-751P-201ENST00000516382 101 ntBASIC3.59□□□□□ -1.83
SEMA3DO95025 SCARNA14-201ENST00000516903 136 ntBASIC3.59□□□□□ -1.83
SEMA3DO95025 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.59□□□□□ -1.83
SEMA3DO95025 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.59□□□□□ -1.83
SEMA3DO95025 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.59□□□□□ -1.83
SEMA3DO95025 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.59□□□□□ -1.83
SEMA3DO95025 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.59□□□□□ -1.83
SEMA3DO95025 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.59□□□□□ -1.83
SEMA3DO95025 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.59□□□□□ -1.83
SEMA3DO95025 NF1P5-201ENST00000588287 448 ntBASIC3.59□□□□□ -1.83
SEMA3DO95025 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.59□□□□□ -1.83
SEMA3DO95025 LLPHP1-201ENST00000603571 367 ntBASIC3.59□□□□□ -1.83
SEMA3DO95025 AC005344.1-201ENST00000613391 459 ntBASIC3.59□□□□□ -1.83
SEMA3DO95025 MIR8058-201ENST00000615737 89 ntBASIC3.59□□□□□ -1.83
SEMA3DO95025 AC079684.1-201ENST00000621405 437 ntBASIC3.59□□□□□ -1.83
SEMA3DO95025 FP236240.3-201ENST00000623061 327 ntBASIC3.59□□□□□ -1.83
SEMA3DO95025 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SEMA3DO95025 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
SEMA3DO95025 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
SEMA3DO95025 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SEMA3DO95025 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
SEMA3DO95025 RNU6-31P-201ENST00000384388 108 ntBASIC3.58□□□□□ -1.84
SEMA3DO95025 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SEMA3DO95025 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC3.58□□□□□ -1.84
SEMA3DO95025 ZNF92P1Y-201ENST00000415010 1191 ntBASIC3.58□□□□□ -1.84
SEMA3DO95025 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SEMA3DO95025 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.58□□□□□ -1.84
SEMA3DO95025 AL049610.1-201ENST00000423374 372 ntBASIC3.58□□□□□ -1.84
SEMA3DO95025 AL591419.1-201ENST00000427423 339 ntBASIC3.58□□□□□ -1.84
SEMA3DO95025 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.58□□□□□ -1.84
SEMA3DO95025 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC3.58□□□□□ -1.84
SEMA3DO95025 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.58□□□□□ -1.84
SEMA3DO95025 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.58□□□□□ -1.84
SEMA3DO95025 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.58□□□□□ -1.84
SEMA3DO95025 RPS7P5-201ENST00000441482 581 ntBASIC3.58□□□□□ -1.84
SEMA3DO95025 AC245517.2-201ENST00000442890 346 ntBASIC3.58□□□□□ -1.84
SEMA3DO95025 NUTF2P7-201ENST00000453086 375 ntBASIC3.58□□□□□ -1.84
SEMA3DO95025 NANOGP10-201ENST00000453325 895 ntBASIC3.58□□□□□ -1.84
SEMA3DO95025 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.58□□□□□ -1.84
SEMA3DO95025 RPL23AP14-201ENST00000468281 468 ntBASIC3.58□□□□□ -1.84
SEMA3DO95025 AP000893.1-201ENST00000474462 794 ntBASIC3.58□□□□□ -1.84
SEMA3DO95025 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.58□□□□□ -1.84
SEMA3DO95025 AL139099.1-201ENST00000497398 403 ntBASIC3.58□□□□□ -1.84
SEMA3DO95025 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.58□□□□□ -1.84
SEMA3DO95025 RNU6-352P-201ENST00000516908 107 ntBASIC3.58□□□□□ -1.84
SEMA3DO95025 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.58□□□□□ -1.84
SEMA3DO95025 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SEMA3DO95025 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC3.58□□□□□ -1.84
SEMA3DO95025 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.58□□□□□ -1.84
SEMA3DO95025 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.58□□□□□ -1.84
SEMA3DO95025 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.58□□□□□ -1.84
SEMA3DO95025 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.58□□□□□ -1.84
SEMA3DO95025 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC3.58□□□□□ -1.84
SEMA3DO95025 AL163642.2-201ENST00000604722 1019 ntBASIC3.58□□□□□ -1.84
SEMA3DO95025 RNA5SP108-201ENST00000605921 117 ntBASIC3.58□□□□□ -1.84
SEMA3DO95025 AP003117.2-201ENST00000606010 545 ntBASIC3.58□□□□□ -1.84
SEMA3DO95025 MIR6875-201ENST00000617506 72 ntBASIC3.58□□□□□ -1.84
SEMA3DO95025 AL354798.1-201ENST00000622505 329 ntBASIC3.58□□□□□ -1.84
SEMA3DO95025 AC048347.1-201ENST00000624621 427 ntBASIC3.58□□□□□ -1.84
SEMA3DO95025 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.58□□□□□ -1.84
SEMA3DO95025 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.58□□□□□ -1.84
SEMA3DO95025 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SEMA3DO95025 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SEMA3DO95025 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.58□□□□□ -1.84
SEMA3DO95025 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms