Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4□□□□□ -1.77
LMX1BO60663 SNORA70F-201ENST00000384142 135 ntBASIC4□□□□□ -1.77
LMX1BO60663 RNU6-1263P-201ENST00000384601 106 ntBASIC4□□□□□ -1.77
LMX1BO60663 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4□□□□□ -1.77
LMX1BO60663 U3.22-201ENST00000391120 215 ntBASIC4□□□□□ -1.77
LMX1BO60663 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4□□□□□ -1.77
LMX1BO60663 AL049697.2-201ENST00000403708 294 ntBASIC4□□□□□ -1.77
LMX1BO60663 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4□□□□□ -1.77
LMX1BO60663 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC4□□□□□ -1.77
LMX1BO60663 AP000357.1-201ENST00000409926 1165 ntBASIC4□□□□□ -1.77
LMX1BO60663 AC004690.1-201ENST00000418216 328 ntBASIC4□□□□□ -1.77
LMX1BO60663 PAICSP7-201ENST00000419829 962 ntBASIC4□□□□□ -1.77
LMX1BO60663 PTP4A1P1-201ENST00000420539 515 ntBASIC4□□□□□ -1.77
LMX1BO60663 RPL23AP1-201ENST00000428990 471 ntBASIC4□□□□□ -1.77
LMX1BO60663 RPL21P91-201ENST00000429231 479 ntBASIC4□□□□□ -1.77
LMX1BO60663 CDY14P-201ENST00000431260 1014 ntBASIC4□□□□□ -1.77
LMX1BO60663 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4□□□□□ -1.77
LMX1BO60663 FTH1P16-201ENST00000435241 552 ntBASIC4□□□□□ -1.77
LMX1BO60663 CYCSP11-201ENST00000436426 315 ntBASIC4□□□□□ -1.77
LMX1BO60663 AC009263.1-201ENST00000441193 1239 ntBASIC4□□□□□ -1.77
LMX1BO60663 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC4□□□□□ -1.77
LMX1BO60663 AC009961.3-201ENST00000449832 765 ntBASIC4□□□□□ -1.77
LMX1BO60663 AL591363.1-201ENST00000450091 483 ntBASIC4□□□□□ -1.77
LMX1BO60663 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4□□□□□ -1.77
LMX1BO60663 CDY23P-201ENST00000451661 1014 ntBASIC4□□□□□ -1.77
LMX1BO60663 CEACAMP6-201ENST00000452007 574 ntBASIC4□□□□□ -1.77
LMX1BO60663 DNAJC19P8-201ENST00000452887 259 ntBASIC4□□□□□ -1.77
LMX1BO60663 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4□□□□□ -1.77
LMX1BO60663 AP000942.1-201ENST00000463969 747 ntBASIC4□□□□□ -1.77
LMX1BO60663 AC037198.2-201ENST00000478845 733 ntBASIC4□□□□□ -1.77
LMX1BO60663 AC013356.1-201ENST00000489027 564 ntBASIC4□□□□□ -1.77
LMX1BO60663 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4□□□□□ -1.77
LMX1BO60663 AC083829.1-201ENST00000503756 657 ntBASIC4□□□□□ -1.77
LMX1BO60663 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4□□□□□ -1.77
LMX1BO60663 AC116353.3-201ENST00000511215 249 ntBASIC4□□□□□ -1.77
LMX1BO60663 AC010625.1-201ENST00000511296 403 ntBASIC4□□□□□ -1.77
LMX1BO60663 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4□□□□□ -1.77
LMX1BO60663 AC008494.2-201ENST00000514544 370 ntBASIC4□□□□□ -1.77
LMX1BO60663 RNU2-30P-201ENST00000516209 141 ntBASIC4□□□□□ -1.77
LMX1BO60663 RNU6-416P-201ENST00000516265 103 ntBASIC4□□□□□ -1.77
LMX1BO60663 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC4□□□□□ -1.77
LMX1BO60663 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC4□□□□□ -1.77
LMX1BO60663 OR4C2P-201ENST00000530855 1064 ntBASIC4□□□□□ -1.77
LMX1BO60663 AP000619.3-201ENST00000535634 1127 ntBASIC4□□□□□ -1.77
LMX1BO60663 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4□□□□□ -1.77
LMX1BO60663 RFPL1S-203ENST00000539579 330 ntBASIC4□□□□□ -1.77
LMX1BO60663 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4□□□□□ -1.77
LMX1BO60663 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
LMX1BO60663 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4□□□□□ -1.77
LMX1BO60663 AC012213.3-201ENST00000577199 777 ntBASIC4□□□□□ -1.77
LMX1BO60663 RN7SL652P-201ENST00000577769 300 ntBASIC4□□□□□ -1.77
LMX1BO60663 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
LMX1BO60663 SNORD39.2-201ENST00000579995 76 ntBASIC4□□□□□ -1.77
LMX1BO60663 AC068790.6-201ENST00000602558 258 ntBASIC4□□□□□ -1.77
LMX1BO60663 AC080078.2-201ENST00000603766 501 ntBASIC4□□□□□ -1.77
LMX1BO60663 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4□□□□□ -1.77
LMX1BO60663 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC4□□□□□ -1.77
LMX1BO60663 AC004223.4-201ENST00000612426 332 ntBASIC4□□□□□ -1.77
LMX1BO60663 AL133243.1-201ENST00000614487 366 ntBASIC4□□□□□ -1.77
LMX1BO60663 AC091931.1-201ENST00000623488 728 ntBASIC4□□□□□ -1.77
LMX1BO60663 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4□□□□□ -1.77
LMX1BO60663 AC092184.1-201ENST00000625042 715 ntBASIC4□□□□□ -1.77
LMX1BO60663 AL049536.1-201ENST00000625043 744 ntBASIC4□□□□□ -1.77
LMX1BO60663 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4□□□□□ -1.77
LMX1BO60663 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
LMX1BO60663 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4□□□□□ -1.77
LMX1BO60663 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
LMX1BO60663 AC091046.3-201ENST00000631455 1574 ntBASIC4□□□□□ -1.77
LMX1BO60663 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4□□□□□ -1.77
LMX1BO60663 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
LMX1BO60663 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC4□□□□□ -1.77
LMX1BO60663 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4□□□□□ -1.77
LMX1BO60663 DDX18P4-201ENST00000511690 1966 ntBASIC4□□□□□ -1.77
LMX1BO60663 AC087190.4-201ENST00000574616 8334 ntBASIC4□□□□□ -1.77
LMX1BO60663 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
LMX1BO60663 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
LMX1BO60663 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
LMX1BO60663 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC3.99□□□□□ -1.77
LMX1BO60663 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
LMX1BO60663 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
LMX1BO60663 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
LMX1BO60663 AL137100.1-201ENST00000556703 1620 ntBASIC3.99□□□□□ -1.77
LMX1BO60663 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
LMX1BO60663 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
LMX1BO60663 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC3.99□□□□□ -1.77
LMX1BO60663 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
LMX1BO60663 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
LMX1BO60663 AC135352.1-201ENST00000506173 1418 ntBASIC3.99□□□□□ -1.77
LMX1BO60663 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
LMX1BO60663 SUPT16HP1-201ENST00000537175 3133 ntBASIC3.99□□□□□ -1.77
LMX1BO60663 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
LMX1BO60663 SNORD113.2-201ENST00000364166 89 ntBASIC3.99□□□□□ -1.77
LMX1BO60663 Y_RNA.408-201ENST00000383987 102 ntBASIC3.99□□□□□ -1.77
LMX1BO60663 RNU6-1200P-201ENST00000384162 107 ntBASIC3.99□□□□□ -1.77
LMX1BO60663 MIR129-1-201ENST00000384972 72 ntBASIC3.99□□□□□ -1.77
LMX1BO60663 RNU6-192P-201ENST00000391253 100 ntBASIC3.99□□□□□ -1.77
LMX1BO60663 AC092745.2-202ENST00000411880 369 ntBASIC3.99□□□□□ -1.77
LMX1BO60663 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC3.99□□□□□ -1.77
LMX1BO60663 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.99□□□□□ -1.77
LMX1BO60663 AC004448.2-201ENST00000422360 586 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms