Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 EOGT-210ENST00000615922 1931 ntBASIC4.03□□□□□ -1.76
PRKNO60260 SGO1P1-201ENST00000603525 1447 ntBASIC4.03□□□□□ -1.76
PRKNO60260 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
PRKNO60260 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.03□□□□□ -1.76
PRKNO60260 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.03□□□□□ -1.77
PRKNO60260 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.02□□□□□ -1.77
PRKNO60260 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PRKNO60260 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PRKNO60260 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PRKNO60260 DCAF13P3-201ENST00000561147 1334 ntBASIC4.02□□□□□ -1.77
PRKNO60260 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
PRKNO60260 AC092435.4-201ENST00000623012 4159 ntBASIC4.02□□□□□ -1.77
PRKNO60260 LINC01109-201ENST00000603837 3081 ntBASIC4.02□□□□□ -1.77
PRKNO60260 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
PRKNO60260 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.02□□□□□ -1.77
PRKNO60260 RNU1-44P-201ENST00000384453 163 ntBASIC4.02□□□□□ -1.77
PRKNO60260 MIR16-1-201ENST00000385271 89 ntBASIC4.02□□□□□ -1.77
PRKNO60260 AL049693.1-201ENST00000402760 611 ntBASIC4.02□□□□□ -1.77
PRKNO60260 AL359643.1-201ENST00000404109 423 ntBASIC4.02□□□□□ -1.77
PRKNO60260 GSTA8P-201ENST00000404253 637 ntBASIC4.02□□□□□ -1.77
PRKNO60260 RNA5SP36-201ENST00000410197 133 ntBASIC4.02□□□□□ -1.77
PRKNO60260 MIR1911-201ENST00000410783 80 ntBASIC4.02□□□□□ -1.77
PRKNO60260 EIF4A1P3-201ENST00000411521 244 ntBASIC4.02□□□□□ -1.77
PRKNO60260 RAP1BP1-201ENST00000412709 553 ntBASIC4.02□□□□□ -1.77
PRKNO60260 RPL23AP26-201ENST00000412728 464 ntBASIC4.02□□□□□ -1.77
PRKNO60260 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.02□□□□□ -1.77
PRKNO60260 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.02□□□□□ -1.77
PRKNO60260 PTP4A1P5-201ENST00000420305 455 ntBASIC4.02□□□□□ -1.77
PRKNO60260 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC4.02□□□□□ -1.77
PRKNO60260 RPL7P53-201ENST00000421245 739 ntBASIC4.02□□□□□ -1.77
PRKNO60260 RSL24D1P6-201ENST00000426934 401 ntBASIC4.02□□□□□ -1.77
PRKNO60260 AC073069.1-201ENST00000428657 441 ntBASIC4.02□□□□□ -1.77
PRKNO60260 DYNLL1P7-201ENST00000429273 258 ntBASIC4.02□□□□□ -1.77
PRKNO60260 TXNL1P1-201ENST00000429528 554 ntBASIC4.02□□□□□ -1.77
PRKNO60260 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.02□□□□□ -1.77
PRKNO60260 GTF2IP7-202ENST00000436677 309 ntBASIC4.02□□□□□ -1.77
PRKNO60260 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.02□□□□□ -1.77
PRKNO60260 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.02□□□□□ -1.77
PRKNO60260 AC104306.1-201ENST00000449702 371 ntBASIC4.02□□□□□ -1.77
PRKNO60260 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC4.02□□□□□ -1.77
PRKNO60260 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.02□□□□□ -1.77
PRKNO60260 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.02□□□□□ -1.77
PRKNO60260 BET1P1-201ENST00000482276 359 ntBASIC4.02□□□□□ -1.77
PRKNO60260 UBA52P3-201ENST00000491303 382 ntBASIC4.02□□□□□ -1.77
PRKNO60260 RN7SL691P-201ENST00000494487 301 ntBASIC4.02□□□□□ -1.77
PRKNO60260 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.02□□□□□ -1.77
PRKNO60260 DYNLL1P6-201ENST00000503440 264 ntBASIC4.02□□□□□ -1.77
PRKNO60260 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.02□□□□□ -1.77
PRKNO60260 AC105313.1-201ENST00000509121 353 ntBASIC4.02□□□□□ -1.77
PRKNO60260 OR5H4P-201ENST00000510851 923 ntBASIC4.02□□□□□ -1.77
PRKNO60260 NDUFB4P12-201ENST00000513465 390 ntBASIC4.02□□□□□ -1.77
PRKNO60260 RNA5SP464-201ENST00000516251 108 ntBASIC4.02□□□□□ -1.77
PRKNO60260 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.02□□□□□ -1.77
PRKNO60260 AP003461.1-201ENST00000528866 78 ntBASIC4.02□□□□□ -1.77
PRKNO60260 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PRKNO60260 OR4C2P-201ENST00000530855 1064 ntBASIC4.02□□□□□ -1.77
PRKNO60260 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.02□□□□□ -1.77
PRKNO60260 CYCSP28-201ENST00000534284 321 ntBASIC4.02□□□□□ -1.77
PRKNO60260 ERP27-202ENST00000540097 993 ntTSL 2 BASIC4.02□□□□□ -1.77
PRKNO60260 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.02□□□□□ -1.77
PRKNO60260 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.02□□□□□ -1.77
PRKNO60260 NBEAP1-201ENST00000554452 979 ntBASIC4.02□□□□□ -1.77
PRKNO60260 MTCYBP27-201ENST00000555160 670 ntBASIC4.02□□□□□ -1.77
PRKNO60260 RPL23AP97-201ENST00000568955 471 ntBASIC4.02□□□□□ -1.77
PRKNO60260 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.02□□□□□ -1.77
PRKNO60260 BPTFP1-201ENST00000579209 492 ntBASIC4.02□□□□□ -1.77
PRKNO60260 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.02□□□□□ -1.77
PRKNO60260 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PRKNO60260 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.02□□□□□ -1.77
PRKNO60260 AC097505.1-201ENST00000610199 565 ntBASIC4.02□□□□□ -1.77
PRKNO60260 AC018926.3-201ENST00000618841 406 ntBASIC4.02□□□□□ -1.77
PRKNO60260 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.02□□□□□ -1.77
PRKNO60260 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
PRKNO60260 AC022509.4-201ENST00000621404 572 ntBASIC4.02□□□□□ -1.77
PRKNO60260 AC067852.7-201ENST00000623270 535 ntBASIC4.02□□□□□ -1.77
PRKNO60260 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.02□□□□□ -1.77
PRKNO60260 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
PRKNO60260 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
PRKNO60260 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PRKNO60260 AC025263.3-201ENST00000622965 1396 ntBASIC4.02□□□□□ -1.77
PRKNO60260 ASNSP1-201ENST00000518311 1939 ntBASIC4.01□□□□□ -1.77
PRKNO60260 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.01□□□□□ -1.77
PRKNO60260 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
PRKNO60260 AC046144.1-201ENST00000478559 1853 ntBASIC4.01□□□□□ -1.77
PRKNO60260 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PRKNO60260 AP000756.2-201ENST00000624168 2567 ntBASIC4.01□□□□□ -1.77
PRKNO60260 RNA5SP366-201ENST00000365454 123 ntBASIC4.01□□□□□ -1.77
PRKNO60260 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PRKNO60260 SNORD66.1-201ENST00000391230 76 ntBASIC4.01□□□□□ -1.77
PRKNO60260 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
PRKNO60260 AL356131.1-201ENST00000405826 414 ntBASIC4.01□□□□□ -1.77
PRKNO60260 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.01□□□□□ -1.77
PRKNO60260 AC009518.2-201ENST00000418056 731 ntBASIC4.01□□□□□ -1.77
PRKNO60260 AC007435.1-201ENST00000421086 415 ntBASIC4.01□□□□□ -1.77
PRKNO60260 AL590609.2-201ENST00000421430 368 ntBASIC4.01□□□□□ -1.77
PRKNO60260 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.01□□□□□ -1.77
PRKNO60260 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.01□□□□□ -1.77
PRKNO60260 RPL7P4-203ENST00000430239 730 ntBASIC4.01□□□□□ -1.77
PRKNO60260 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PRKNO60260 AL353597.2-202ENST00000434901 373 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms