Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.76□□□□□ -1.81
LSM1O15116 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.76□□□□□ -1.81
LSM1O15116 AC090877.1-201ENST00000561418 344 ntBASIC3.76□□□□□ -1.81
LSM1O15116 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
LSM1O15116 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.76□□□□□ -1.81
LSM1O15116 RNVU1-4-201ENST00000612985 164 ntBASIC3.76□□□□□ -1.81
LSM1O15116 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.76□□□□□ -1.81
LSM1O15116 ATE1-AS1-202ENST00000636460 506 ntBASIC3.76□□□□□ -1.81
LSM1O15116 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
LSM1O15116 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.76□□□□□ -1.81
LSM1O15116 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.76□□□□□ -1.81
LSM1O15116 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.75□□□□□ -1.81
LSM1O15116 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
LSM1O15116 AC083799.1-201ENST00000366451 910 ntBASIC3.75□□□□□ -1.81
LSM1O15116 MIR585-201ENST00000384887 94 ntBASIC3.75□□□□□ -1.81
LSM1O15116 HLFP1-201ENST00000402375 499 ntBASIC3.75□□□□□ -1.81
LSM1O15116 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.75□□□□□ -1.81
LSM1O15116 OR8G2P-201ENST00000412796 908 ntBASIC3.75□□□□□ -1.81
LSM1O15116 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
LSM1O15116 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.75□□□□□ -1.81
LSM1O15116 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
LSM1O15116 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.75□□□□□ -1.81
LSM1O15116 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.75□□□□□ -1.81
LSM1O15116 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.75□□□□□ -1.81
LSM1O15116 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.75□□□□□ -1.81
LSM1O15116 AL035458.1-201ENST00000433096 585 ntBASIC3.75□□□□□ -1.81
LSM1O15116 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.75□□□□□ -1.81
LSM1O15116 CEACAMP9-201ENST00000442990 513 ntBASIC3.75□□□□□ -1.81
LSM1O15116 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.75□□□□□ -1.81
LSM1O15116 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.75□□□□□ -1.81
LSM1O15116 AC010468.1-201ENST00000461022 817 ntBASIC3.75□□□□□ -1.81
LSM1O15116 TRBV8-2-201ENST00000475637 270 ntBASIC3.75□□□□□ -1.81
LSM1O15116 AC078817.1-201ENST00000492623 435 ntBASIC3.75□□□□□ -1.81
LSM1O15116 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.75□□□□□ -1.81
LSM1O15116 AC008562.1-201ENST00000521763 330 ntBASIC3.75□□□□□ -1.81
LSM1O15116 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.75□□□□□ -1.81
LSM1O15116 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.75□□□□□ -1.81
LSM1O15116 MIR4284-201ENST00000578924 81 ntBASIC3.75□□□□□ -1.81
LSM1O15116 AC091167.4-201ENST00000605079 184 ntBASIC3.75□□□□□ -1.81
LSM1O15116 ARF4P1-201ENST00000605447 541 ntBASIC3.75□□□□□ -1.81
LSM1O15116 BX323046.1-201ENST00000610145 535 ntBASIC3.75□□□□□ -1.81
LSM1O15116 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
LSM1O15116 AL139089.1-201ENST00000620372 975 ntBASIC3.75□□□□□ -1.81
LSM1O15116 SNORA50A-202ENST00000629536 136 ntBASIC3.75□□□□□ -1.81
LSM1O15116 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.75□□□□□ -1.81
LSM1O15116 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
LSM1O15116 HSPA8P19-201ENST00000505359 1517 ntBASIC3.75□□□□□ -1.81
LSM1O15116 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
LSM1O15116 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
LSM1O15116 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.74□□□□□ -1.81
LSM1O15116 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LSM1O15116 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LSM1O15116 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
LSM1O15116 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.74□□□□□ -1.81
LSM1O15116 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.74□□□□□ -1.81
LSM1O15116 OR6C69P-201ENST00000394268 893 ntBASIC3.74□□□□□ -1.81
LSM1O15116 HMGB1P10-201ENST00000395823 563 ntBASIC3.74□□□□□ -1.81
LSM1O15116 ATP5F1P4-201ENST00000397288 746 ntBASIC3.74□□□□□ -1.81
LSM1O15116 MTATP6P31-201ENST00000406985 692 ntBASIC3.74□□□□□ -1.81
LSM1O15116 RPS15AP6-201ENST00000420703 385 ntBASIC3.74□□□□□ -1.81
LSM1O15116 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.74□□□□□ -1.81
LSM1O15116 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.74□□□□□ -1.81
LSM1O15116 AC008065.1-201ENST00000428525 348 ntBASIC3.74□□□□□ -1.81
LSM1O15116 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC3.74□□□□□ -1.81
LSM1O15116 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.74□□□□□ -1.81
LSM1O15116 PPIAP3-201ENST00000450588 505 ntBASIC3.74□□□□□ -1.81
LSM1O15116 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
LSM1O15116 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC3.74□□□□□ -1.81
LSM1O15116 SSR3-208ENST00000496050 579 ntTSL 4 BASIC3.74□□□□□ -1.81
LSM1O15116 RNA5SP179-201ENST00000517284 121 ntBASIC3.74□□□□□ -1.81
LSM1O15116 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.74□□□□□ -1.81
LSM1O15116 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.74□□□□□ -1.81
LSM1O15116 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.74□□□□□ -1.81
LSM1O15116 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.74□□□□□ -1.81
LSM1O15116 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.74□□□□□ -1.81
LSM1O15116 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.74□□□□□ -1.81
LSM1O15116 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.74□□□□□ -1.81
LSM1O15116 AL133457.1-201ENST00000564251 987 ntBASIC3.74□□□□□ -1.81
LSM1O15116 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LSM1O15116 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.74□□□□□ -1.81
LSM1O15116 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
LSM1O15116 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
LSM1O15116 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC3.74□□□□□ -1.81
LSM1O15116 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
LSM1O15116 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
LSM1O15116 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
LSM1O15116 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.74□□□□□ -1.81
LSM1O15116 CASC19-261ENST00000641853 1638 ntBASIC3.73□□□□□ -1.81
LSM1O15116 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.73□□□□□ -1.81
LSM1O15116 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
LSM1O15116 AP002001.2-201ENST00000529025 1469 ntBASIC3.73□□□□□ -1.81
LSM1O15116 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
LSM1O15116 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
LSM1O15116 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
LSM1O15116 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.73□□□□□ -1.81
LSM1O15116 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
LSM1O15116 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.73□□□□□ -1.81
LSM1O15116 DDX6P1-205ENST00000441966 1436 ntBASIC3.73□□□□□ -1.81
LSM1O15116 AC021755.1-201ENST00000559747 1447 ntBASIC3.73□□□□□ -1.81
LSM1O15116 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms