Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.75
RTCAO00442 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
RTCAO00442 AC006971.1-201ENST00000407916 4486 ntBASIC4.15□□□□□ -1.75
RTCAO00442 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
RTCAO00442 AL359893.1-201ENST00000447628 1580 ntBASIC4.14□□□□□ -1.75
RTCAO00442 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RTCAO00442 AC073055.1-201ENST00000456901 1621 ntBASIC4.14□□□□□ -1.75
RTCAO00442 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.14□□□□□ -1.75
RTCAO00442 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
RTCAO00442 RNU6-837P-201ENST00000391056 108 ntBASIC4.14□□□□□ -1.75
RTCAO00442 U3.22-201ENST00000391120 215 ntBASIC4.14□□□□□ -1.75
RTCAO00442 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.14□□□□□ -1.75
RTCAO00442 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.14□□□□□ -1.75
RTCAO00442 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.14□□□□□ -1.75
RTCAO00442 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC4.14□□□□□ -1.75
RTCAO00442 OFD1P18Y-201ENST00000420889 959 ntBASIC4.14□□□□□ -1.75
RTCAO00442 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.14□□□□□ -1.75
RTCAO00442 COX6CP15-201ENST00000426313 211 ntBASIC4.14□□□□□ -1.75
RTCAO00442 AC096632.1-201ENST00000427395 310 ntBASIC4.14□□□□□ -1.75
RTCAO00442 CNOT7P1-201ENST00000429006 852 ntBASIC4.14□□□□□ -1.75
RTCAO00442 AC068287.1-201ENST00000430283 295 ntBASIC4.14□□□□□ -1.75
RTCAO00442 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC4.14□□□□□ -1.75
RTCAO00442 RPL23AP52-201ENST00000439311 478 ntBASIC4.14□□□□□ -1.75
RTCAO00442 CEACAMP9-201ENST00000442990 513 ntBASIC4.14□□□□□ -1.75
RTCAO00442 ELOCP13-201ENST00000443934 329 ntBASIC4.14□□□□□ -1.75
RTCAO00442 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.14□□□□□ -1.75
RTCAO00442 PHBP16-201ENST00000446318 950 ntBASIC4.14□□□□□ -1.75
RTCAO00442 AL162151.2-201ENST00000448875 158 ntBASIC4.14□□□□□ -1.75
RTCAO00442 MTATP6P14-201ENST00000455189 673 ntBASIC4.14□□□□□ -1.75
RTCAO00442 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.14□□□□□ -1.75
RTCAO00442 NF1P3-201ENST00000457709 450 ntBASIC4.14□□□□□ -1.75
RTCAO00442 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.14□□□□□ -1.75
RTCAO00442 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.14□□□□□ -1.75
RTCAO00442 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RTCAO00442 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.14□□□□□ -1.75
RTCAO00442 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.14□□□□□ -1.75
RTCAO00442 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.14□□□□□ -1.75
RTCAO00442 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.14□□□□□ -1.75
RTCAO00442 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC4.14□□□□□ -1.75
RTCAO00442 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.14□□□□□ -1.75
RTCAO00442 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.14□□□□□ -1.75
RTCAO00442 AC090666.1-201ENST00000578241 445 ntBASIC4.14□□□□□ -1.75
RTCAO00442 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.14□□□□□ -1.75
RTCAO00442 AL355812.1-201ENST00000603215 216 ntBASIC4.14□□□□□ -1.75
RTCAO00442 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.14□□□□□ -1.75
RTCAO00442 AC090948.1-201ENST00000607464 549 ntBASIC4.14□□□□□ -1.75
RTCAO00442 AC124016.2-201ENST00000610058 665 ntBASIC4.14□□□□□ -1.75
RTCAO00442 MIR6820-201ENST00000611508 62 ntBASIC4.14□□□□□ -1.75
RTCAO00442 AL121890.3-201ENST00000618494 516 ntBASIC4.14□□□□□ -1.75
RTCAO00442 AC009269.6-201ENST00000621778 588 ntBASIC4.14□□□□□ -1.75
RTCAO00442 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.14□□□□□ -1.75
RTCAO00442 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.14□□□□□ -1.75
RTCAO00442 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.14□□□□□ -1.75
RTCAO00442 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RTCAO00442 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RTCAO00442 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.14□□□□□ -1.75
RTCAO00442 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.14□□□□□ -1.75
RTCAO00442 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
RTCAO00442 IQCB2P-201ENST00000401788 1633 ntBASIC4.13□□□□□ -1.75
RTCAO00442 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.13□□□□□ -1.75
RTCAO00442 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RTCAO00442 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RTCAO00442 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
RTCAO00442 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
RTCAO00442 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
RTCAO00442 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RTCAO00442 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RTCAO00442 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
RTCAO00442 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
RTCAO00442 ZNF734P-201ENST00000419494 1534 ntBASIC4.13□□□□□ -1.75
RTCAO00442 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.13□□□□□ -1.75
RTCAO00442 RNU6-925P-201ENST00000384629 104 ntBASIC4.13□□□□□ -1.75
RTCAO00442 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
RTCAO00442 SNORD66.1-201ENST00000391230 76 ntBASIC4.13□□□□□ -1.75
RTCAO00442 SNORA11B-201ENST00000408175 129 ntBASIC4.13□□□□□ -1.75
RTCAO00442 PAICSP7-201ENST00000419829 962 ntBASIC4.13□□□□□ -1.75
RTCAO00442 RPL36P19-201ENST00000430744 301 ntBASIC4.13□□□□□ -1.75
RTCAO00442 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC4.13□□□□□ -1.75
RTCAO00442 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.13□□□□□ -1.75
RTCAO00442 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.13□□□□□ -1.75
RTCAO00442 CCNB1IP1P3-201ENST00000454702 829 ntBASIC4.13□□□□□ -1.75
RTCAO00442 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.13□□□□□ -1.75
RTCAO00442 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC4.13□□□□□ -1.75
RTCAO00442 HMGB1P38-201ENST00000490557 577 ntBASIC4.13□□□□□ -1.75
RTCAO00442 RN7SL812P-201ENST00000493791 279 ntBASIC4.13□□□□□ -1.75
RTCAO00442 RNU6-202P-201ENST00000515998 96 ntBASIC4.13□□□□□ -1.75
RTCAO00442 RN7SKP116-201ENST00000516902 319 ntBASIC4.13□□□□□ -1.75
RTCAO00442 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.13□□□□□ -1.75
RTCAO00442 CDH12P4-201ENST00000517835 295 ntBASIC4.13□□□□□ -1.75
RTCAO00442 CDH12P3-201ENST00000517935 295 ntBASIC4.13□□□□□ -1.75
RTCAO00442 CDH12P1-201ENST00000518435 295 ntBASIC4.13□□□□□ -1.75
RTCAO00442 MTCYBP41-201ENST00000528913 1123 ntBASIC4.13□□□□□ -1.75
RTCAO00442 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.13□□□□□ -1.75
RTCAO00442 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.13□□□□□ -1.75
RTCAO00442 AC010735.1-201ENST00000567305 1026 ntBASIC4.13□□□□□ -1.75
RTCAO00442 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.13□□□□□ -1.75
RTCAO00442 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.13□□□□□ -1.75
RTCAO00442 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.13□□□□□ -1.75
RTCAO00442 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.13□□□□□ -1.75
RTCAO00442 AC113403.1-201ENST00000604910 193 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms