Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 SEC11B-201ENST00000518383 499 ntBASIC3.67□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.67□□□□□ -1.82
TMX2-CTNND1H3BSU7 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.67□□□□□ -1.82
TMX2-CTNND1H3BSU7 OR4A2P-201ENST00000527276 913 ntBASIC3.67□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TMX2-CTNND1H3BSU7 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.67□□□□□ -1.82
TMX2-CTNND1H3BSU7 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.67□□□□□ -1.82
TMX2-CTNND1H3BSU7 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC3.67□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC3.67□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC3.67□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC3.67□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC012213.4-201ENST00000606457 354 ntBASIC3.67□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC007620.3-201ENST00000608131 497 ntBASIC3.67□□□□□ -1.82
TMX2-CTNND1H3BSU7 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.67□□□□□ -1.82
TMX2-CTNND1H3BSU7 AL591424.2-201ENST00000617023 128 ntBASIC3.67□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC3.67□□□□□ -1.82
TMX2-CTNND1H3BSU7 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC3.67□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.67□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
TMX2-CTNND1H3BSU7 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TMX2-CTNND1H3BSU7 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TMX2-CTNND1H3BSU7 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TMX2-CTNND1H3BSU7 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC114546.3-201ENST00000623582 1734 ntBASIC3.67□□□□□ -1.82
TMX2-CTNND1H3BSU7 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TMX2-CTNND1H3BSU7 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TMX2-CTNND1H3BSU7 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TMX2-CTNND1H3BSU7 CNOT6LP1-201ENST00000559681 1462 ntBASIC3.67□□□□□ -1.82
TMX2-CTNND1H3BSU7 IPO8P1-201ENST00000455509 3109 ntBASIC3.66□□□□□ -1.82
TMX2-CTNND1H3BSU7 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.66□□□□□ -1.82
TMX2-CTNND1H3BSU7 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TMX2-CTNND1H3BSU7 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC3.66□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC093010.3-201ENST00000570269 15214 ntBASIC3.66□□□□□ -1.82
TMX2-CTNND1H3BSU7 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC3.66□□□□□ -1.82
TMX2-CTNND1H3BSU7 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.66□□□□□ -1.82
TMX2-CTNND1H3BSU7 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.66□□□□□ -1.82
TMX2-CTNND1H3BSU7 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.66□□□□□ -1.82
TMX2-CTNND1H3BSU7 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TMX2-CTNND1H3BSU7 MTCO3P43-201ENST00000440974 771 ntBASIC3.66□□□□□ -1.82
TMX2-CTNND1H3BSU7 PRDX3P3-201ENST00000447765 522 ntBASIC3.66□□□□□ -1.82
TMX2-CTNND1H3BSU7 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.66□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC068305.1-201ENST00000497406 726 ntBASIC3.66□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC108941.1-201ENST00000502853 530 ntBASIC3.66□□□□□ -1.82
TMX2-CTNND1H3BSU7 DSTNP2-201ENST00000504533 515 ntBASIC3.66□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.66□□□□□ -1.82
TMX2-CTNND1H3BSU7 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.66□□□□□ -1.82
TMX2-CTNND1H3BSU7 HMGN1P15-201ENST00000513870 295 ntBASIC3.66□□□□□ -1.82
TMX2-CTNND1H3BSU7 RNU6-491P-201ENST00000516099 110 ntBASIC3.66□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC008802.1-201ENST00000519121 791 ntBASIC3.66□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.66□□□□□ -1.82
TMX2-CTNND1H3BSU7 OR4C2P-201ENST00000530855 1064 ntBASIC3.66□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.66□□□□□ -1.82
TMX2-CTNND1H3BSU7 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.66□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.66□□□□□ -1.82
TMX2-CTNND1H3BSU7 MIR4644-201ENST00000579929 84 ntBASIC3.66□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC017100.2-201ENST00000584628 355 ntBASIC3.66□□□□□ -1.82
TMX2-CTNND1H3BSU7 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.66□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC006946.3-201ENST00000609791 756 ntBASIC3.66□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC096577.2-201ENST00000611455 153 ntBASIC3.66□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC104307.1-201ENST00000616142 196 ntBASIC3.66□□□□□ -1.82
TMX2-CTNND1H3BSU7 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.66□□□□□ -1.82
TMX2-CTNND1H3BSU7 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.66□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC119674.1-220ENST00000641502 1048 ntBASIC3.66□□□□□ -1.82
TMX2-CTNND1H3BSU7 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TMX2-CTNND1H3BSU7 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TMX2-CTNND1H3BSU7 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC007529.1-201ENST00000418574 2178 ntBASIC3.66□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC066616.2-201ENST00000559334 1481 ntBASIC3.66□□□□□ -1.82
TMX2-CTNND1H3BSU7 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.82
TMX2-CTNND1H3BSU7 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
TMX2-CTNND1H3BSU7 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC007066.1-201ENST00000392902 381 ntBASIC3.65□□□□□ -1.83
TMX2-CTNND1H3BSU7 PTMAP5-201ENST00000393073 333 ntBASIC3.65□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC3.65□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.65□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC127526.1-201ENST00000417526 366 ntBASIC3.65□□□□□ -1.83
TMX2-CTNND1H3BSU7 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.65□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC3.65□□□□□ -1.83
TMX2-CTNND1H3BSU7 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC3.65□□□□□ -1.83
TMX2-CTNND1H3BSU7 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
TMX2-CTNND1H3BSU7 SKP1P1-201ENST00000438081 489 ntBASIC3.65□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC104978.1-201ENST00000449387 391 ntBASIC3.65□□□□□ -1.83
TMX2-CTNND1H3BSU7 HGF-207ENST00000453018 721 ntTSL 3 BASIC3.65□□□□□ -1.83
TMX2-CTNND1H3BSU7 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.65□□□□□ -1.83
TMX2-CTNND1H3BSU7 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC004801.2-202ENST00000463559 283 ntBASIC3.65□□□□□ -1.83
TMX2-CTNND1H3BSU7 RPL7P24-201ENST00000493052 752 ntBASIC3.65□□□□□ -1.83
TMX2-CTNND1H3BSU7 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC3.65□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC004069.2-201ENST00000505438 1114 ntBASIC3.65□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.65□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.65□□□□□ -1.83
TMX2-CTNND1H3BSU7 SCARNA14-201ENST00000516903 136 ntBASIC3.65□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.65□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC3.65□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC092868.3-201ENST00000560515 784 ntBASIC3.65□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.65□□□□□ -1.83
TMX2-CTNND1H3BSU7 ELOCP35-201ENST00000604289 336 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms