Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.28□□□□□ -1.73
RGPD3A6NKT7 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.27□□□□□ -1.73
RGPD3A6NKT7 AC092809.1-201ENST00000441469 474 ntBASIC4.27□□□□□ -1.73
RGPD3A6NKT7 KCTD9P6-201ENST00000522306 950 ntBASIC4.27□□□□□ -1.73
RGPD3A6NKT7 AC020914.4-201ENST00000597690 277 ntBASIC4.27□□□□□ -1.73
RGPD3A6NKT7 BDH2P1-201ENST00000602288 736 ntBASIC4.27□□□□□ -1.73
RGPD3A6NKT7 AL390838.2-201ENST00000602394 274 ntBASIC4.27□□□□□ -1.73
RGPD3A6NKT7 OR2AS2P-201ENST00000606902 342 ntBASIC4.27□□□□□ -1.73
RGPD3A6NKT7 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RGPD3A6NKT7 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
RGPD3A6NKT7 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC4.27□□□□□ -1.73
RGPD3A6NKT7 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RGPD3A6NKT7 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RGPD3A6NKT7 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RGPD3A6NKT7 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.27□□□□□ -1.73
RGPD3A6NKT7 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RGPD3A6NKT7 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
RGPD3A6NKT7 RPL5P18-201ENST00000406671 891 ntBASIC4.27□□□□□ -1.73
RGPD3A6NKT7 RNA5SP184-201ENST00000411071 108 ntBASIC4.27□□□□□ -1.73
RGPD3A6NKT7 MOB1AP1-201ENST00000430903 535 ntBASIC4.27□□□□□ -1.73
RGPD3A6NKT7 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC4.27□□□□□ -1.73
RGPD3A6NKT7 AL133477.1-201ENST00000457472 514 ntBASIC4.27□□□□□ -1.73
RGPD3A6NKT7 RPL5P16-201ENST00000471467 790 ntBASIC4.27□□□□□ -1.73
RGPD3A6NKT7 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.27□□□□□ -1.73
RGPD3A6NKT7 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.27□□□□□ -1.73
RGPD3A6NKT7 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.27□□□□□ -1.73
RGPD3A6NKT7 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.27□□□□□ -1.73
RGPD3A6NKT7 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.27□□□□□ -1.73
RGPD3A6NKT7 AC022882.1-201ENST00000532142 501 ntBASIC4.27□□□□□ -1.73
RGPD3A6NKT7 AC087888.1-201ENST00000550884 1254 ntBASIC4.27□□□□□ -1.73
RGPD3A6NKT7 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.27□□□□□ -1.73
RGPD3A6NKT7 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.27□□□□□ -1.73
RGPD3A6NKT7 AL157817.1-201ENST00000614264 790 ntBASIC4.27□□□□□ -1.73
RGPD3A6NKT7 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RGPD3A6NKT7 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.26□□□□□ -1.73
RGPD3A6NKT7 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RGPD3A6NKT7 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RGPD3A6NKT7 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.26□□□□□ -1.73
RGPD3A6NKT7 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.26□□□□□ -1.73
RGPD3A6NKT7 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RGPD3A6NKT7 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
RGPD3A6NKT7 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RGPD3A6NKT7 OR56A5-201ENST00000340110 738 ntBASIC4.26□□□□□ -1.73
RGPD3A6NKT7 AL121834.1-202ENST00000404494 277 ntBASIC4.26□□□□□ -1.73
RGPD3A6NKT7 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.26□□□□□ -1.73
RGPD3A6NKT7 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.26□□□□□ -1.73
RGPD3A6NKT7 AC021678.1-201ENST00000505195 936 ntBASIC4.26□□□□□ -1.73
RGPD3A6NKT7 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC4.26□□□□□ -1.73
RGPD3A6NKT7 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.26□□□□□ -1.73
RGPD3A6NKT7 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.26□□□□□ -1.73
RGPD3A6NKT7 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.26□□□□□ -1.73
RGPD3A6NKT7 AL157394.1-201ENST00000562983 1224 ntBASIC4.26□□□□□ -1.73
RGPD3A6NKT7 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC4.26□□□□□ -1.73
RGPD3A6NKT7 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.26□□□□□ -1.73
RGPD3A6NKT7 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC4.26□□□□□ -1.73
RGPD3A6NKT7 KPNA2P2-201ENST00000419546 1489 ntBASIC4.26□□□□□ -1.73
RGPD3A6NKT7 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RGPD3A6NKT7 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.26□□□□□ -1.73
RGPD3A6NKT7 AL672296.1-201ENST00000427780 2158 ntBASIC4.26□□□□□ -1.73
RGPD3A6NKT7 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC4.26□□□□□ -1.73
RGPD3A6NKT7 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RGPD3A6NKT7 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RGPD3A6NKT7 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RGPD3A6NKT7 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.25□□□□□ -1.73
RGPD3A6NKT7 RNU1-70P-201ENST00000362618 164 ntBASIC4.25□□□□□ -1.73
RGPD3A6NKT7 RNA5SP104-201ENST00000410989 118 ntBASIC4.25□□□□□ -1.73
RGPD3A6NKT7 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.25□□□□□ -1.73
RGPD3A6NKT7 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RGPD3A6NKT7 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.25□□□□□ -1.73
RGPD3A6NKT7 AL360157.1-201ENST00000565962 87 ntBASIC4.25□□□□□ -1.73
RGPD3A6NKT7 AC067852.4-201ENST00000590314 478 ntBASIC4.25□□□□□ -1.73
RGPD3A6NKT7 MRPS35P3-201ENST00000603189 709 ntBASIC4.25□□□□□ -1.73
RGPD3A6NKT7 AC231759.1-201ENST00000616455 597 ntBASIC4.25□□□□□ -1.73
RGPD3A6NKT7 AL353684.1-201ENST00000622677 1120 ntBASIC4.25□□□□□ -1.73
RGPD3A6NKT7 AC018692.3-201ENST00000623929 123 ntBASIC4.25□□□□□ -1.73
RGPD3A6NKT7 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RGPD3A6NKT7 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RGPD3A6NKT7 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RGPD3A6NKT7 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RGPD3A6NKT7 TOPORSLP1-201ENST00000467693 2102 ntBASIC4.25□□□□□ -1.73
RGPD3A6NKT7 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.25□□□□□ -1.73
RGPD3A6NKT7 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RGPD3A6NKT7 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.25□□□□□ -1.73
RGPD3A6NKT7 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RGPD3A6NKT7 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
RGPD3A6NKT7 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RGPD3A6NKT7 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
RGPD3A6NKT7 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC4.25□□□□□ -1.73
RGPD3A6NKT7 USP12PY-201ENST00000427677 1064 ntBASIC4.25□□□□□ -1.73
RGPD3A6NKT7 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC4.25□□□□□ -1.73
RGPD3A6NKT7 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RGPD3A6NKT7 Y_RNA.638-201ENST00000459374 113 ntBASIC4.25□□□□□ -1.73
RGPD3A6NKT7 RPL23AP71-201ENST00000470966 469 ntBASIC4.25□□□□□ -1.73
RGPD3A6NKT7 AL121766.1-201ENST00000547436 487 ntBASIC4.25□□□□□ -1.73
RGPD3A6NKT7 MIR4319-201ENST00000577285 85 ntBASIC4.25□□□□□ -1.73
RGPD3A6NKT7 AC006946.3-201ENST00000609791 756 ntBASIC4.25□□□□□ -1.73
RGPD3A6NKT7 AC009237.17-201ENST00000618111 748 ntBASIC4.25□□□□□ -1.73
RGPD3A6NKT7 AC022149.2-201ENST00000621061 203 ntBASIC4.25□□□□□ -1.73
RGPD3A6NKT7 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC4.25□□□□□ -1.73
RGPD3A6NKT7 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms