Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.97□□□□□ -1.77
RNF103-CHMP3A0A140T963 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC3.97□□□□□ -1.77
RNF103-CHMP3A0A140T963 AC063950.1-201ENST00000552036 308 ntBASIC3.97□□□□□ -1.77
RNF103-CHMP3A0A140T963 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC3.97□□□□□ -1.77
RNF103-CHMP3A0A140T963 BPTFP1-201ENST00000579209 492 ntBASIC3.97□□□□□ -1.77
RNF103-CHMP3A0A140T963 AC124283.4-201ENST00000581815 456 ntBASIC3.97□□□□□ -1.77
RNF103-CHMP3A0A140T963 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC3.97□□□□□ -1.77
RNF103-CHMP3A0A140T963 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.97□□□□□ -1.77
RNF103-CHMP3A0A140T963 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.97□□□□□ -1.77
RNF103-CHMP3A0A140T963 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.97□□□□□ -1.77
RNF103-CHMP3A0A140T963 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.97□□□□□ -1.77
RNF103-CHMP3A0A140T963 AC020923.1-201ENST00000624021 917 ntBASIC3.97□□□□□ -1.77
RNF103-CHMP3A0A140T963 AF001550.2-201ENST00000636643 217 ntBASIC3.97□□□□□ -1.77
RNF103-CHMP3A0A140T963 AL590396.4-201ENST00000636779 956 ntBASIC3.97□□□□□ -1.77
RNF103-CHMP3A0A140T963 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.97□□□□□ -1.77
RNF103-CHMP3A0A140T963 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.97□□□□□ -1.77
RNF103-CHMP3A0A140T963 ZNF37BP-203ENST00000452306 1352 ntBASIC3.97□□□□□ -1.77
RNF103-CHMP3A0A140T963 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RNF103-CHMP3A0A140T963 FAM35DP-201ENST00000323387 2712 ntBASIC3.97□□□□□ -1.77
RNF103-CHMP3A0A140T963 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.97□□□□□ -1.77
RNF103-CHMP3A0A140T963 ZNF849P-201ENST00000594711 1566 ntBASIC3.97□□□□□ -1.77
RNF103-CHMP3A0A140T963 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.97□□□□□ -1.77
RNF103-CHMP3A0A140T963 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.96□□□□□ -1.77
RNF103-CHMP3A0A140T963 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RNF103-CHMP3A0A140T963 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
RNF103-CHMP3A0A140T963 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RNF103-CHMP3A0A140T963 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
RNF103-CHMP3A0A140T963 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.96□□□□□ -1.78
RNF103-CHMP3A0A140T963 RNU6-398P-201ENST00000384143 109 ntBASIC3.96□□□□□ -1.78
RNF103-CHMP3A0A140T963 RNU6-441P-201ENST00000384545 106 ntBASIC3.96□□□□□ -1.78
RNF103-CHMP3A0A140T963 RNA5SP36-201ENST00000410197 133 ntBASIC3.96□□□□□ -1.78
RNF103-CHMP3A0A140T963 RPP40P1-201ENST00000426762 456 ntBASIC3.96□□□□□ -1.78
RNF103-CHMP3A0A140T963 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.96□□□□□ -1.78
RNF103-CHMP3A0A140T963 AC096632.1-201ENST00000427395 310 ntBASIC3.96□□□□□ -1.78
RNF103-CHMP3A0A140T963 USP12PY-201ENST00000427677 1064 ntBASIC3.96□□□□□ -1.78
RNF103-CHMP3A0A140T963 BRWD1P3-201ENST00000428816 390 ntBASIC3.96□□□□□ -1.78
RNF103-CHMP3A0A140T963 AC114973.1-201ENST00000429057 632 ntBASIC3.96□□□□□ -1.78
RNF103-CHMP3A0A140T963 AC087650.1-201ENST00000431445 468 ntBASIC3.96□□□□□ -1.78
RNF103-CHMP3A0A140T963 RPL21P112-201ENST00000434403 463 ntBASIC3.96□□□□□ -1.78
RNF103-CHMP3A0A140T963 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RNF103-CHMP3A0A140T963 MOB1AP2-201ENST00000446060 614 ntBASIC3.96□□□□□ -1.78
RNF103-CHMP3A0A140T963 AL162151.2-201ENST00000448875 158 ntBASIC3.96□□□□□ -1.78
RNF103-CHMP3A0A140T963 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.96□□□□□ -1.78
RNF103-CHMP3A0A140T963 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.96□□□□□ -1.78
RNF103-CHMP3A0A140T963 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.96□□□□□ -1.78
RNF103-CHMP3A0A140T963 AC008628.1-201ENST00000508663 265 ntBASIC3.96□□□□□ -1.78
RNF103-CHMP3A0A140T963 AC104057.1-201ENST00000515547 497 ntBASIC3.96□□□□□ -1.78
RNF103-CHMP3A0A140T963 NARSP2-201ENST00000518524 679 ntBASIC3.96□□□□□ -1.78
RNF103-CHMP3A0A140T963 IGKV2D-36-201ENST00000518643 226 ntBASIC3.96□□□□□ -1.78
RNF103-CHMP3A0A140T963 IGLVIV-53-201ENST00000520107 367 ntBASIC3.96□□□□□ -1.78
RNF103-CHMP3A0A140T963 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.96□□□□□ -1.78
RNF103-CHMP3A0A140T963 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.96□□□□□ -1.78
RNF103-CHMP3A0A140T963 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.96□□□□□ -1.78
RNF103-CHMP3A0A140T963 AP003049.1-201ENST00000529418 457 ntBASIC3.96□□□□□ -1.78
RNF103-CHMP3A0A140T963 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.96□□□□□ -1.78
RNF103-CHMP3A0A140T963 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.96□□□□□ -1.78
RNF103-CHMP3A0A140T963 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.96□□□□□ -1.78
RNF103-CHMP3A0A140T963 AC092470.1-201ENST00000546187 132 ntBASIC3.96□□□□□ -1.78
RNF103-CHMP3A0A140T963 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.96□□□□□ -1.78
RNF103-CHMP3A0A140T963 NIFKP8-201ENST00000560500 874 ntBASIC3.96□□□□□ -1.78
RNF103-CHMP3A0A140T963 AC093510.2-201ENST00000562820 896 ntBASIC3.96□□□□□ -1.78
RNF103-CHMP3A0A140T963 AC107954.1-201ENST00000565906 727 ntBASIC3.96□□□□□ -1.78
RNF103-CHMP3A0A140T963 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.96□□□□□ -1.78
RNF103-CHMP3A0A140T963 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.96□□□□□ -1.78
RNF103-CHMP3A0A140T963 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RNF103-CHMP3A0A140T963 IGHV3-29-201ENST00000604817 344 ntBASIC3.96□□□□□ -1.78
RNF103-CHMP3A0A140T963 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RNF103-CHMP3A0A140T963 MIR486-1-201ENST00000612171 68 ntBASIC3.96□□□□□ -1.78
RNF103-CHMP3A0A140T963 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RNF103-CHMP3A0A140T963 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.96□□□□□ -1.78
RNF103-CHMP3A0A140T963 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
RNF103-CHMP3A0A140T963 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
RNF103-CHMP3A0A140T963 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.96□□□□□ -1.78
RNF103-CHMP3A0A140T963 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
RNF103-CHMP3A0A140T963 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.96□□□□□ -1.78
RNF103-CHMP3A0A140T963 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
RNF103-CHMP3A0A140T963 BDP1P-201ENST00000582658 1990 ntBASIC3.96□□□□□ -1.78
RNF103-CHMP3A0A140T963 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.96□□□□□ -1.78
RNF103-CHMP3A0A140T963 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RNF103-CHMP3A0A140T963 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RNF103-CHMP3A0A140T963 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.95□□□□□ -1.78
RNF103-CHMP3A0A140T963 RNU1-14P-201ENST00000362759 152 ntBASIC3.95□□□□□ -1.78
RNF103-CHMP3A0A140T963 RNU1-85P-201ENST00000364127 164 ntBASIC3.95□□□□□ -1.78
RNF103-CHMP3A0A140T963 RNU6-335P-201ENST00000364563 113 ntBASIC3.95□□□□□ -1.78
RNF103-CHMP3A0A140T963 SNORA37-201ENST00000384504 129 ntBASIC3.95□□□□□ -1.78
RNF103-CHMP3A0A140T963 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.95□□□□□ -1.78
RNF103-CHMP3A0A140T963 USP9YP19-201ENST00000412165 485 ntBASIC3.95□□□□□ -1.78
RNF103-CHMP3A0A140T963 OR51A3P-201ENST00000413596 924 ntBASIC3.95□□□□□ -1.78
RNF103-CHMP3A0A140T963 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC3.95□□□□□ -1.78
RNF103-CHMP3A0A140T963 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC3.95□□□□□ -1.78
RNF103-CHMP3A0A140T963 RBMY2KP-201ENST00000418221 992 ntBASIC3.95□□□□□ -1.78
RNF103-CHMP3A0A140T963 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.95□□□□□ -1.78
RNF103-CHMP3A0A140T963 DEFB130D-201ENST00000426866 237 ntBASIC3.95□□□□□ -1.78
RNF103-CHMP3A0A140T963 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC3.95□□□□□ -1.78
RNF103-CHMP3A0A140T963 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.95□□□□□ -1.78
RNF103-CHMP3A0A140T963 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC3.95□□□□□ -1.78
RNF103-CHMP3A0A140T963 HMGN3P1-201ENST00000453847 193 ntBASIC3.95□□□□□ -1.78
RNF103-CHMP3A0A140T963 NAP1L1P3-201ENST00000462291 880 ntBASIC3.95□□□□□ -1.78
RNF103-CHMP3A0A140T963 AC010307.1-201ENST00000467206 836 ntBASIC3.95□□□□□ -1.78
RNF103-CHMP3A0A140T963 PRDX3P4-201ENST00000470828 747 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms