Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.35□□□□□ -1.71
TRBV5-3A0A0A0MS03 RPL37P3-201ENST00000456825 293 ntBASIC4.35□□□□□ -1.71
TRBV5-3A0A0A0MS03 AC005532.2-201ENST00000467154 373 ntBASIC4.35□□□□□ -1.71
TRBV5-3A0A0A0MS03 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.35□□□□□ -1.71
TRBV5-3A0A0A0MS03 AC008953.1-201ENST00000497334 318 ntBASIC4.35□□□□□ -1.71
TRBV5-3A0A0A0MS03 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TRBV5-3A0A0A0MS03 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.35□□□□□ -1.71
TRBV5-3A0A0A0MS03 AC079140.3-201ENST00000511111 550 ntBASIC4.35□□□□□ -1.71
TRBV5-3A0A0A0MS03 RPL7L1P13-201ENST00000511702 739 ntBASIC4.35□□□□□ -1.71
TRBV5-3A0A0A0MS03 RNY4P37-201ENST00000516225 96 ntBASIC4.35□□□□□ -1.71
TRBV5-3A0A0A0MS03 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.35□□□□□ -1.71
TRBV5-3A0A0A0MS03 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
TRBV5-3A0A0A0MS03 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.35□□□□□ -1.71
TRBV5-3A0A0A0MS03 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC4.35□□□□□ -1.71
TRBV5-3A0A0A0MS03 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.35□□□□□ -1.71
TRBV5-3A0A0A0MS03 AF279873.1-201ENST00000523393 313 ntBASIC4.35□□□□□ -1.71
TRBV5-3A0A0A0MS03 AP002963.1-201ENST00000530590 184 ntBASIC4.35□□□□□ -1.71
TRBV5-3A0A0A0MS03 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.35□□□□□ -1.71
TRBV5-3A0A0A0MS03 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.35□□□□□ -1.71
TRBV5-3A0A0A0MS03 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
TRBV5-3A0A0A0MS03 AC124068.1-201ENST00000563131 678 ntBASIC4.35□□□□□ -1.71
TRBV5-3A0A0A0MS03 AC093519.1-201ENST00000566109 298 ntBASIC4.35□□□□□ -1.71
TRBV5-3A0A0A0MS03 AC010546.1-201ENST00000569391 485 ntBASIC4.35□□□□□ -1.71
TRBV5-3A0A0A0MS03 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC4.35□□□□□ -1.71
TRBV5-3A0A0A0MS03 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.35□□□□□ -1.71
TRBV5-3A0A0A0MS03 AC079089.3-201ENST00000603094 673 ntBASIC4.35□□□□□ -1.71
TRBV5-3A0A0A0MS03 AL021997.1-201ENST00000605757 193 ntBASIC4.35□□□□□ -1.71
TRBV5-3A0A0A0MS03 AC022467.1-201ENST00000614738 749 ntBASIC4.35□□□□□ -1.71
TRBV5-3A0A0A0MS03 AC243756.2-201ENST00000618406 463 ntBASIC4.35□□□□□ -1.71
TRBV5-3A0A0A0MS03 AC092650.2-201ENST00000619984 902 ntBASIC4.35□□□□□ -1.71
TRBV5-3A0A0A0MS03 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
TRBV5-3A0A0A0MS03 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
TRBV5-3A0A0A0MS03 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.35□□□□□ -1.71
TRBV5-3A0A0A0MS03 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.35□□□□□ -1.71
TRBV5-3A0A0A0MS03 AC092435.4-201ENST00000623012 4159 ntBASIC4.35□□□□□ -1.71
TRBV5-3A0A0A0MS03 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TRBV5-3A0A0A0MS03 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TRBV5-3A0A0A0MS03 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
TRBV5-3A0A0A0MS03 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
TRBV5-3A0A0A0MS03 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.35□□□□□ -1.71
TRBV5-3A0A0A0MS03 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TRBV5-3A0A0A0MS03 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
TRBV5-3A0A0A0MS03 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
TRBV5-3A0A0A0MS03 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TRBV5-3A0A0A0MS03 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TRBV5-3A0A0A0MS03 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TRBV5-3A0A0A0MS03 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
TRBV5-3A0A0A0MS03 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.35□□□□□ -1.71
TRBV5-3A0A0A0MS03 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TRBV5-3A0A0A0MS03 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
TRBV5-3A0A0A0MS03 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.34□□□□□ -1.71
TRBV5-3A0A0A0MS03 IRF5P1-201ENST00000504852 2164 ntBASIC4.34□□□□□ -1.71
TRBV5-3A0A0A0MS03 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TRBV5-3A0A0A0MS03 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC4.34□□□□□ -1.71
TRBV5-3A0A0A0MS03 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
TRBV5-3A0A0A0MS03 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TRBV5-3A0A0A0MS03 NOL8P1-201ENST00000508336 3529 ntBASIC4.34□□□□□ -1.71
TRBV5-3A0A0A0MS03 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
TRBV5-3A0A0A0MS03 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.34□□□□□ -1.71
TRBV5-3A0A0A0MS03 RN7SKP206-201ENST00000410823 293 ntBASIC4.34□□□□□ -1.71
TRBV5-3A0A0A0MS03 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.34□□□□□ -1.71
TRBV5-3A0A0A0MS03 FCF1P2-201ENST00000415284 583 ntBASIC4.34□□□□□ -1.71
TRBV5-3A0A0A0MS03 AC062016.2-201ENST00000420950 676 ntBASIC4.34□□□□□ -1.71
TRBV5-3A0A0A0MS03 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.34□□□□□ -1.71
TRBV5-3A0A0A0MS03 CYCSP46-201ENST00000423569 204 ntBASIC4.34□□□□□ -1.71
TRBV5-3A0A0A0MS03 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.34□□□□□ -1.71
TRBV5-3A0A0A0MS03 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.34□□□□□ -1.71
TRBV5-3A0A0A0MS03 RAB11AP1-201ENST00000442978 646 ntBASIC4.34□□□□□ -1.71
TRBV5-3A0A0A0MS03 CDC27P1-201ENST00000445384 715 ntBASIC4.34□□□□□ -1.71
TRBV5-3A0A0A0MS03 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.34□□□□□ -1.71
TRBV5-3A0A0A0MS03 H2AFZP5-201ENST00000446960 382 ntBASIC4.34□□□□□ -1.71
TRBV5-3A0A0A0MS03 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.34□□□□□ -1.71
TRBV5-3A0A0A0MS03 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.34□□□□□ -1.71
TRBV5-3A0A0A0MS03 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TRBV5-3A0A0A0MS03 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TRBV5-3A0A0A0MS03 NDUFA5P7-201ENST00000452914 242 ntBASIC4.34□□□□□ -1.71
TRBV5-3A0A0A0MS03 SNRPGP9-201ENST00000456025 225 ntBASIC4.34□□□□□ -1.71
TRBV5-3A0A0A0MS03 CFTRP1-201ENST00000456646 183 ntBASIC4.34□□□□□ -1.71
TRBV5-3A0A0A0MS03 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.34□□□□□ -1.71
TRBV5-3A0A0A0MS03 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.34□□□□□ -1.71
TRBV5-3A0A0A0MS03 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TRBV5-3A0A0A0MS03 RN7SL591P-201ENST00000496150 292 ntBASIC4.34□□□□□ -1.71
TRBV5-3A0A0A0MS03 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.34□□□□□ -1.71
TRBV5-3A0A0A0MS03 AC006499.5-201ENST00000505037 514 ntBASIC4.34□□□□□ -1.71
TRBV5-3A0A0A0MS03 AC106872.4-201ENST00000510050 523 ntBASIC4.34□□□□□ -1.71
TRBV5-3A0A0A0MS03 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
TRBV5-3A0A0A0MS03 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
TRBV5-3A0A0A0MS03 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC4.34□□□□□ -1.71
TRBV5-3A0A0A0MS03 BTF3P13-201ENST00000513224 490 ntBASIC4.34□□□□□ -1.71
TRBV5-3A0A0A0MS03 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.34□□□□□ -1.71
TRBV5-3A0A0A0MS03 RN7SKP66-201ENST00000516681 231 ntBASIC4.34□□□□□ -1.71
TRBV5-3A0A0A0MS03 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC4.34□□□□□ -1.71
TRBV5-3A0A0A0MS03 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.34□□□□□ -1.71
TRBV5-3A0A0A0MS03 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TRBV5-3A0A0A0MS03 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC4.34□□□□□ -1.71
TRBV5-3A0A0A0MS03 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TRBV5-3A0A0A0MS03 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.34□□□□□ -1.71
TRBV5-3A0A0A0MS03 AC008033.2-201ENST00000542626 177 ntBASIC4.34□□□□□ -1.71
TRBV5-3A0A0A0MS03 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TRBV5-3A0A0A0MS03 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms