Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 ARMCX3-207ENST00000537169 3318 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 AC097504.1-201ENST00000515103 2415 ntBASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 Z97989.1-201ENST00000531702 2421 ntBASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 DLD-204ENST00000437604 1859 ntTSL 2 BASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 TRIM60-204ENST00000512596 1888 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 PPFIA2-220ENST00000550584 5405 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 AL590065.1-201ENST00000603371 4774 ntBASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 AL359922.2-201ENST00000581788 3017 ntBASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 CASC19-246ENST00000641625 1606 ntBASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 RNU6-1120P-201ENST00000362988 108 ntBASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 RNA5SP65-201ENST00000363166 119 ntBASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 RNU6-618P-201ENST00000363518 112 ntBASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 U3.12-201ENST00000364498 214 ntBASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 RNU6-621P-201ENST00000364752 109 ntBASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 RNU6-619P-201ENST00000365146 108 ntBASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 RNU6-1074P-201ENST00000383995 104 ntBASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 Y_RNA.435-201ENST00000384095 112 ntBASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 MIR199B-201ENST00000384849 110 ntBASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 RN7SKP271-201ENST00000410528 320 ntBASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 AC019050.1-201ENST00000418508 492 ntBASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 TRGV5P-201ENST00000419915 354 ntBASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 UBE2D3P2-201ENST00000424409 445 ntBASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 TOMM20P4-201ENST00000427861 435 ntBASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 AC108479.1-201ENST00000431142 427 ntBASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 RPS20P1-201ENST00000434853 354 ntBASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 RPL37P21-201ENST00000435890 276 ntBASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 AC006335.2-201ENST00000437993 330 ntBASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 OR3D1P-201ENST00000438288 955 ntBASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 AL390119.1-201ENST00000440329 312 ntBASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 FHP1-201ENST00000442741 703 ntBASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 CXCR2P1-202ENST00000443392 1074 ntBASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 RPS3AP12-201ENST00000443616 753 ntBASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 POU5F1P5-201ENST00000445059 658 ntBASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 MTND1P17-201ENST00000448961 204 ntBASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 AL031737.1-201ENST00000450125 223 ntBASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 AL445991.1-201ENST00000450381 475 ntBASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 MTND3P16-201ENST00000452205 344 ntBASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 AC118758.1-202ENST00000454719 225 ntBASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 Y_RNA.651-201ENST00000459380 103 ntBASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 RPS27P20-201ENST00000492051 246 ntBASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 RPS23P5-201ENST00000495419 428 ntBASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 SNX18P24-201ENST00000505249 671 ntBASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 AC113367.2-201ENST00000505749 160 ntBASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 OR4D12P-201ENST00000509361 911 ntBASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 RNU6-1061P-201ENST00000516530 99 ntBASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 SNORA40.14-201ENST00000516543 86 ntBASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 RNU2-46P-201ENST00000517038 113 ntBASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 AC084121.1-201ENST00000533882 835 ntBASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 YWHABP2-201ENST00000540201 713 ntBASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 EEF1A1P17-201ENST00000547505 1275 ntBASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 AC107958.1-201ENST00000556576 290 ntBASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 AC090826.1-203ENST00000569235 490 ntBASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 MIR3912-201ENST00000577566 105 ntBASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 MIR5188-201ENST00000583467 113 ntBASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 NPIPB1P-202ENST00000588786 828 ntBASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 AC060780.2-201ENST00000589047 198 ntBASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC2.22□□□□□ -2.05
KRTAP4-3Q9BYR4 AC004805.3-201ENST00000603178 310 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms