Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC6.49□□□□□ -1.37
TRAIPQ9BWF2 SUGT1P3-202ENST00000604259 383 ntBASIC6.49□□□□□ -1.37
TRAIPQ9BWF2 IGHV3-29-201ENST00000604817 344 ntBASIC6.49□□□□□ -1.37
TRAIPQ9BWF2 AC010680.4-201ENST00000605334 543 ntBASIC6.49□□□□□ -1.37
TRAIPQ9BWF2 AL355472.4-201ENST00000610233 626 ntBASIC6.49□□□□□ -1.37
TRAIPQ9BWF2 AC109309.2-201ENST00000612597 332 ntBASIC6.49□□□□□ -1.37
TRAIPQ9BWF2 AC112204.3-201ENST00000623822 332 ntBASIC6.49□□□□□ -1.37
TRAIPQ9BWF2 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC6.49□□□□□ -1.37
TRAIPQ9BWF2 AC022893.2-201ENST00000564832 3296 ntBASIC6.49□□□□□ -1.37
TRAIPQ9BWF2 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TRAIPQ9BWF2 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.49□□□□□ -1.37
TRAIPQ9BWF2 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
TRAIPQ9BWF2 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TRAIPQ9BWF2 AC004158.1-201ENST00000564508 4319 ntBASIC6.49□□□□□ -1.37
TRAIPQ9BWF2 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
TRAIPQ9BWF2 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
TRAIPQ9BWF2 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC6.49□□□□□ -1.37
TRAIPQ9BWF2 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
TRAIPQ9BWF2 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
TRAIPQ9BWF2 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
TRAIPQ9BWF2 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
TRAIPQ9BWF2 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TRAIPQ9BWF2 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.48□□□□□ -1.37
TRAIPQ9BWF2 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TRAIPQ9BWF2 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.48□□□□□ -1.37
TRAIPQ9BWF2 CASC19-248ENST00000641674 1356 ntBASIC6.48□□□□□ -1.37
TRAIPQ9BWF2 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TRAIPQ9BWF2 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
TRAIPQ9BWF2 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TRAIPQ9BWF2 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.48□□□□□ -1.37
TRAIPQ9BWF2 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
TRAIPQ9BWF2 OR10R3P-201ENST00000361688 942 ntBASIC6.48□□□□□ -1.37
TRAIPQ9BWF2 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
TRAIPQ9BWF2 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
TRAIPQ9BWF2 RN7SKP286-201ENST00000410894 299 ntBASIC6.48□□□□□ -1.37
TRAIPQ9BWF2 MTND1P21-201ENST00000412991 285 ntBASIC6.48□□□□□ -1.37
TRAIPQ9BWF2 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC6.48□□□□□ -1.37
TRAIPQ9BWF2 RPS15AP12-201ENST00000419498 388 ntBASIC6.48□□□□□ -1.37
TRAIPQ9BWF2 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC6.48□□□□□ -1.37
TRAIPQ9BWF2 AC006548.1-201ENST00000427470 102 ntBASIC6.48□□□□□ -1.37
TRAIPQ9BWF2 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC6.48□□□□□ -1.37
TRAIPQ9BWF2 AC002486.1-201ENST00000435098 391 ntBASIC6.48□□□□□ -1.37
TRAIPQ9BWF2 MRPL48P1-201ENST00000445390 636 ntBASIC6.48□□□□□ -1.37
TRAIPQ9BWF2 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC6.48□□□□□ -1.37
TRAIPQ9BWF2 RN7SL352P-201ENST00000466002 277 ntBASIC6.48□□□□□ -1.37
TRAIPQ9BWF2 UBA52P7-201ENST00000486088 380 ntBASIC6.48□□□□□ -1.37
TRAIPQ9BWF2 AC055855.1-201ENST00000489563 579 ntBASIC6.48□□□□□ -1.37
TRAIPQ9BWF2 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC6.48□□□□□ -1.37
TRAIPQ9BWF2 AC008629.2-201ENST00000503783 483 ntBASIC6.48□□□□□ -1.37
TRAIPQ9BWF2 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC6.48□□□□□ -1.37
TRAIPQ9BWF2 AC010342.1-201ENST00000514047 877 ntBASIC6.48□□□□□ -1.37
TRAIPQ9BWF2 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.48□□□□□ -1.37
TRAIPQ9BWF2 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC6.48□□□□□ -1.37
TRAIPQ9BWF2 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC6.48□□□□□ -1.37
TRAIPQ9BWF2 AC234778.2-201ENST00000566241 354 ntBASIC6.48□□□□□ -1.37
TRAIPQ9BWF2 AC010547.6-201ENST00000571789 193 ntBASIC6.48□□□□□ -1.37
TRAIPQ9BWF2 MIR3146-201ENST00000580367 79 ntBASIC6.48□□□□□ -1.37
TRAIPQ9BWF2 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC6.48□□□□□ -1.37
TRAIPQ9BWF2 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.48□□□□□ -1.37
TRAIPQ9BWF2 AC145423.1-201ENST00000605712 336 ntBASIC6.48□□□□□ -1.37
TRAIPQ9BWF2 AL021918.2-201ENST00000613415 194 ntBASIC6.48□□□□□ -1.37
TRAIPQ9BWF2 AP003400.3-201ENST00000624904 346 ntBASIC6.48□□□□□ -1.37
TRAIPQ9BWF2 CR381572.1-201ENST00000625098 102 ntBASIC6.48□□□□□ -1.37
TRAIPQ9BWF2 AL159972.1-201ENST00000625150 448 ntBASIC6.48□□□□□ -1.37
TRAIPQ9BWF2 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC6.48□□□□□ -1.37
TRAIPQ9BWF2 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
TRAIPQ9BWF2 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TRAIPQ9BWF2 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.48□□□□□ -1.37
TRAIPQ9BWF2 FAM91A3P-201ENST00000456826 2544 ntBASIC6.48□□□□□ -1.37
TRAIPQ9BWF2 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TRAIPQ9BWF2 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TRAIPQ9BWF2 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRAIPQ9BWF2 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TRAIPQ9BWF2 NMD3P1-201ENST00000439704 1488 ntBASIC6.47□□□□□ -1.37
TRAIPQ9BWF2 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRAIPQ9BWF2 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRAIPQ9BWF2 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRAIPQ9BWF2 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TRAIPQ9BWF2 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TRAIPQ9BWF2 RNU6-989P-201ENST00000362756 107 ntBASIC6.47□□□□□ -1.37
TRAIPQ9BWF2 RNU4-44P-201ENST00000363050 141 ntBASIC6.47□□□□□ -1.37
TRAIPQ9BWF2 RNU6-263P-201ENST00000363811 107 ntBASIC6.47□□□□□ -1.37
TRAIPQ9BWF2 RNU6-1078P-201ENST00000364522 103 ntBASIC6.47□□□□□ -1.37
TRAIPQ9BWF2 Y_RNA.372-201ENST00000365599 102 ntBASIC6.47□□□□□ -1.37
TRAIPQ9BWF2 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC6.47□□□□□ -1.37
TRAIPQ9BWF2 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC6.47□□□□□ -1.37
TRAIPQ9BWF2 MYL6P5-201ENST00000412707 459 ntBASIC6.47□□□□□ -1.37
TRAIPQ9BWF2 RPL34P3-201ENST00000421454 338 ntBASIC6.47□□□□□ -1.37
TRAIPQ9BWF2 AC079355.1-201ENST00000421770 223 ntBASIC6.47□□□□□ -1.37
TRAIPQ9BWF2 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.47□□□□□ -1.37
TRAIPQ9BWF2 AC019097.1-201ENST00000424783 735 ntBASIC6.47□□□□□ -1.37
TRAIPQ9BWF2 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.47□□□□□ -1.37
TRAIPQ9BWF2 SUMO2P3-201ENST00000438311 288 ntBASIC6.47□□□□□ -1.37
TRAIPQ9BWF2 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.47□□□□□ -1.37
TRAIPQ9BWF2 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.47□□□□□ -1.37
TRAIPQ9BWF2 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC6.47□□□□□ -1.37
TRAIPQ9BWF2 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC6.47□□□□□ -1.37
TRAIPQ9BWF2 AC234775.1-201ENST00000454247 670 ntBASIC6.47□□□□□ -1.37
TRAIPQ9BWF2 AC112187.1-201ENST00000455837 479 ntBASIC6.47□□□□□ -1.37
TRAIPQ9BWF2 AC108059.3-201ENST00000456388 214 ntBASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms