Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 AC112484.5-201ENST00000624189 228 ntBASIC4.05□□□□□ -1.76
CCM2Q9BSQ5 AC010872.1-201ENST00000624225 675 ntBASIC4.05□□□□□ -1.76
CCM2Q9BSQ5 AC008785.1-201ENST00000624475 456 ntBASIC4.05□□□□□ -1.76
CCM2Q9BSQ5 CDRT1-208ENST00000630868 794 ntBASIC4.05□□□□□ -1.76
CCM2Q9BSQ5 AC017104.5-201ENST00000637647 639 ntBASIC4.05□□□□□ -1.76
CCM2Q9BSQ5 AC006927.2-201ENST00000639256 389 ntBASIC4.05□□□□□ -1.76
CCM2Q9BSQ5 AC026951.1-201ENST00000559530 2459 ntBASIC4.05□□□□□ -1.76
CCM2Q9BSQ5 AL031985.3-201ENST00000565390 2449 ntBASIC4.05□□□□□ -1.76
CCM2Q9BSQ5 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.05□□□□□ -1.76
CCM2Q9BSQ5 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCM2Q9BSQ5 AC083899.2-201ENST00000423285 1376 ntBASIC4.04□□□□□ -1.76
CCM2Q9BSQ5 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCM2Q9BSQ5 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCM2Q9BSQ5 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCM2Q9BSQ5 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.04□□□□□ -1.76
CCM2Q9BSQ5 AC073055.1-201ENST00000456901 1621 ntBASIC4.04□□□□□ -1.76
CCM2Q9BSQ5 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.04□□□□□ -1.76
CCM2Q9BSQ5 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CCM2Q9BSQ5 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCM2Q9BSQ5 OR11H4-201ENST00000315409 1082 ntBASIC4.04□□□□□ -1.76
CCM2Q9BSQ5 MIR620-201ENST00000385232 95 ntBASIC4.04□□□□□ -1.76
CCM2Q9BSQ5 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CCM2Q9BSQ5 MIR1183-201ENST00000408856 89 ntBASIC4.04□□□□□ -1.76
CCM2Q9BSQ5 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC4.04□□□□□ -1.76
CCM2Q9BSQ5 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.04□□□□□ -1.76
CCM2Q9BSQ5 RPS6P14-201ENST00000425165 719 ntBASIC4.04□□□□□ -1.76
CCM2Q9BSQ5 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC4.04□□□□□ -1.76
CCM2Q9BSQ5 RPS27AP12-201ENST00000429552 465 ntBASIC4.04□□□□□ -1.76
CCM2Q9BSQ5 AC011242.1-201ENST00000433596 1158 ntBASIC4.04□□□□□ -1.76
CCM2Q9BSQ5 ELOCP18-201ENST00000434209 337 ntBASIC4.04□□□□□ -1.76
CCM2Q9BSQ5 FABP5P3-201ENST00000437960 408 ntBASIC4.04□□□□□ -1.76
CCM2Q9BSQ5 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.04□□□□□ -1.76
CCM2Q9BSQ5 RPS26P30-201ENST00000443431 335 ntBASIC4.04□□□□□ -1.76
CCM2Q9BSQ5 AC044797.1-201ENST00000445744 679 ntBASIC4.04□□□□□ -1.76
CCM2Q9BSQ5 AC005002.1-201ENST00000447458 540 ntBASIC4.04□□□□□ -1.76
CCM2Q9BSQ5 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.04□□□□□ -1.76
CCM2Q9BSQ5 AC008280.2-201ENST00000455473 307 ntBASIC4.04□□□□□ -1.76
CCM2Q9BSQ5 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.04□□□□□ -1.76
CCM2Q9BSQ5 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.04□□□□□ -1.76
CCM2Q9BSQ5 RPL29P14-201ENST00000495837 428 ntBASIC4.04□□□□□ -1.76
CCM2Q9BSQ5 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.04□□□□□ -1.76
CCM2Q9BSQ5 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CCM2Q9BSQ5 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC4.04□□□□□ -1.76
CCM2Q9BSQ5 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.04□□□□□ -1.76
CCM2Q9BSQ5 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.04□□□□□ -1.76
CCM2Q9BSQ5 AC023824.3-201ENST00000569003 562 ntBASIC4.04□□□□□ -1.76
CCM2Q9BSQ5 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.04□□□□□ -1.76
CCM2Q9BSQ5 AC090312.2-201ENST00000582687 378 ntBASIC4.04□□□□□ -1.76
CCM2Q9BSQ5 AC124016.2-201ENST00000610058 665 ntBASIC4.04□□□□□ -1.76
CCM2Q9BSQ5 AC123768.4-201ENST00000616244 701 ntBASIC4.04□□□□□ -1.76
CCM2Q9BSQ5 AC009318.3-201ENST00000616916 503 ntBASIC4.04□□□□□ -1.76
CCM2Q9BSQ5 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CCM2Q9BSQ5 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
CCM2Q9BSQ5 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCM2Q9BSQ5 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCM2Q9BSQ5 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.04□□□□□ -1.76
CCM2Q9BSQ5 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.04□□□□□ -1.76
CCM2Q9BSQ5 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.04□□□□□ -1.76
CCM2Q9BSQ5 AC119744.1-201ENST00000454746 1715 ntBASIC4.04□□□□□ -1.76
CCM2Q9BSQ5 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CCM2Q9BSQ5 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCM2Q9BSQ5 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CCM2Q9BSQ5 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCM2Q9BSQ5 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCM2Q9BSQ5 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CCM2Q9BSQ5 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.03□□□□□ -1.76
CCM2Q9BSQ5 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCM2Q9BSQ5 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.03□□□□□ -1.76
CCM2Q9BSQ5 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.76
CCM2Q9BSQ5 RNU5B-4P-201ENST00000363508 111 ntBASIC4.03□□□□□ -1.76
CCM2Q9BSQ5 RN7SKP227-201ENST00000364445 330 ntBASIC4.03□□□□□ -1.76
CCM2Q9BSQ5 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.03□□□□□ -1.76
CCM2Q9BSQ5 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCM2Q9BSQ5 SNORA37-201ENST00000384504 129 ntBASIC4.03□□□□□ -1.76
CCM2Q9BSQ5 RNU6-1000P-201ENST00000391066 106 ntBASIC4.03□□□□□ -1.76
CCM2Q9BSQ5 RNU11-4P-201ENST00000391149 133 ntBASIC4.03□□□□□ -1.76
CCM2Q9BSQ5 RNA5SP39-201ENST00000411245 120 ntBASIC4.03□□□□□ -1.76
CCM2Q9BSQ5 RNU2-6P-201ENST00000411404 190 ntBASIC4.03□□□□□ -1.76
CCM2Q9BSQ5 PGBD4P8-201ENST00000412993 562 ntBASIC4.03□□□□□ -1.76
CCM2Q9BSQ5 UBE2V1P9-201ENST00000414760 368 ntBASIC4.03□□□□□ -1.76
CCM2Q9BSQ5 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.03□□□□□ -1.76
CCM2Q9BSQ5 AL391219.1-201ENST00000422570 483 ntBASIC4.03□□□□□ -1.76
CCM2Q9BSQ5 NANOGP6-201ENST00000429190 847 ntBASIC4.03□□□□□ -1.76
CCM2Q9BSQ5 AL358472.1-201ENST00000431295 329 ntBASIC4.03□□□□□ -1.76
CCM2Q9BSQ5 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.03□□□□□ -1.76
CCM2Q9BSQ5 AC092809.1-201ENST00000441469 474 ntBASIC4.03□□□□□ -1.76
CCM2Q9BSQ5 ZNF736P11Y-201ENST00000442535 1213 ntBASIC4.03□□□□□ -1.76
CCM2Q9BSQ5 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC4.03□□□□□ -1.76
CCM2Q9BSQ5 ZNF736P12Y-201ENST00000443152 1243 ntBASIC4.03□□□□□ -1.76
CCM2Q9BSQ5 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.03□□□□□ -1.76
CCM2Q9BSQ5 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CCM2Q9BSQ5 FABP3P2-201ENST00000453169 399 ntBASIC4.03□□□□□ -1.76
CCM2Q9BSQ5 ZNF736P4Y-201ENST00000454995 1243 ntBASIC4.03□□□□□ -1.76
CCM2Q9BSQ5 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.03□□□□□ -1.76
CCM2Q9BSQ5 PRELID3BP5-201ENST00000508612 460 ntBASIC4.03□□□□□ -1.76
CCM2Q9BSQ5 MTCO1P35-201ENST00000515270 228 ntBASIC4.03□□□□□ -1.76
CCM2Q9BSQ5 RNU7-143P-201ENST00000516781 65 ntBASIC4.03□□□□□ -1.76
CCM2Q9BSQ5 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.03□□□□□ -1.76
CCM2Q9BSQ5 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC4.03□□□□□ -1.76
CCM2Q9BSQ5 AC008562.1-201ENST00000521763 330 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 161.7 ms