Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 RPL21P11-201ENST00000461458 483 ntBASIC3.2□□□□□ -1.9
HDHD3Q9BSH5 AC008379.1-201ENST00000463655 464 ntBASIC3.2□□□□□ -1.9
HDHD3Q9BSH5 PPIAP21-201ENST00000464473 501 ntBASIC3.2□□□□□ -1.9
HDHD3Q9BSH5 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.2□□□□□ -1.9
HDHD3Q9BSH5 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.2□□□□□ -1.9
HDHD3Q9BSH5 AC008494.2-201ENST00000514544 370 ntBASIC3.2□□□□□ -1.9
HDHD3Q9BSH5 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.2□□□□□ -1.9
HDHD3Q9BSH5 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.2□□□□□ -1.9
HDHD3Q9BSH5 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.2□□□□□ -1.9
HDHD3Q9BSH5 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HDHD3Q9BSH5 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.2□□□□□ -1.9
HDHD3Q9BSH5 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.2□□□□□ -1.9
HDHD3Q9BSH5 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.2□□□□□ -1.9
HDHD3Q9BSH5 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.2□□□□□ -1.9
HDHD3Q9BSH5 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC3.2□□□□□ -1.9
HDHD3Q9BSH5 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.2□□□□□ -1.9
HDHD3Q9BSH5 BNIP3P19-201ENST00000605397 577 ntBASIC3.2□□□□□ -1.9
HDHD3Q9BSH5 AL355816.1-201ENST00000607951 118 ntBASIC3.2□□□□□ -1.9
HDHD3Q9BSH5 AC116651.1-201ENST00000609724 556 ntBASIC3.2□□□□□ -1.9
HDHD3Q9BSH5 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.2□□□□□ -1.9
HDHD3Q9BSH5 U6.48-201ENST00000618523 106 ntBASIC3.2□□□□□ -1.9
HDHD3Q9BSH5 MIR6730-201ENST00000622213 67 ntBASIC3.2□□□□□ -1.9
HDHD3Q9BSH5 CR392039.4-201ENST00000624968 501 ntBASIC3.2□□□□□ -1.9
HDHD3Q9BSH5 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.2□□□□□ -1.9
HDHD3Q9BSH5 AC244205.2-202ENST00000635781 342 ntBASIC3.2□□□□□ -1.9
HDHD3Q9BSH5 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.2□□□□□ -1.9
HDHD3Q9BSH5 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
HDHD3Q9BSH5 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HDHD3Q9BSH5 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
HDHD3Q9BSH5 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
HDHD3Q9BSH5 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HDHD3Q9BSH5 RLIMP1-201ENST00000339626 1680 ntBASIC3.2□□□□□ -1.9
HDHD3Q9BSH5 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
HDHD3Q9BSH5 AC134882.1-201ENST00000603738 1676 ntBASIC3.2□□□□□ -1.9
HDHD3Q9BSH5 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HDHD3Q9BSH5 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.2□□□□□ -1.9
HDHD3Q9BSH5 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
HDHD3Q9BSH5 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HDHD3Q9BSH5 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HDHD3Q9BSH5 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.19□□□□□ -1.9
HDHD3Q9BSH5 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HDHD3Q9BSH5 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.19□□□□□ -1.9
HDHD3Q9BSH5 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HDHD3Q9BSH5 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.19□□□□□ -1.9
HDHD3Q9BSH5 RNA5SP27-201ENST00000363839 119 ntBASIC3.19□□□□□ -1.9
HDHD3Q9BSH5 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
HDHD3Q9BSH5 RNU6-354P-201ENST00000383862 107 ntBASIC3.19□□□□□ -1.9
HDHD3Q9BSH5 RNU6-610P-201ENST00000384264 107 ntBASIC3.19□□□□□ -1.9
HDHD3Q9BSH5 MIR585-201ENST00000384887 94 ntBASIC3.19□□□□□ -1.9
HDHD3Q9BSH5 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HDHD3Q9BSH5 AL035405.1-201ENST00000400795 710 ntBASIC3.19□□□□□ -1.9
HDHD3Q9BSH5 AL590290.1-201ENST00000405336 380 ntBASIC3.19□□□□□ -1.9
HDHD3Q9BSH5 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.19□□□□□ -1.9
HDHD3Q9BSH5 RPL31P52-201ENST00000407532 367 ntBASIC3.19□□□□□ -1.9
HDHD3Q9BSH5 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC3.19□□□□□ -1.9
HDHD3Q9BSH5 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.19□□□□□ -1.9
HDHD3Q9BSH5 RPL18P10-201ENST00000425606 538 ntBASIC3.19□□□□□ -1.9
HDHD3Q9BSH5 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3.19□□□□□ -1.9
HDHD3Q9BSH5 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.19□□□□□ -1.9
HDHD3Q9BSH5 AC073069.1-201ENST00000428657 441 ntBASIC3.19□□□□□ -1.9
HDHD3Q9BSH5 MOB1AP1-201ENST00000430903 535 ntBASIC3.19□□□□□ -1.9
HDHD3Q9BSH5 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.19□□□□□ -1.9
HDHD3Q9BSH5 AC006994.1-201ENST00000438212 839 ntBASIC3.19□□□□□ -1.9
HDHD3Q9BSH5 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.19□□□□□ -1.9
HDHD3Q9BSH5 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.19□□□□□ -1.9
HDHD3Q9BSH5 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HDHD3Q9BSH5 RPL21P18-201ENST00000469899 480 ntBASIC3.19□□□□□ -1.9
HDHD3Q9BSH5 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.19□□□□□ -1.9
HDHD3Q9BSH5 AC110792.1-201ENST00000491826 472 ntBASIC3.19□□□□□ -1.9
HDHD3Q9BSH5 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.19□□□□□ -1.9
HDHD3Q9BSH5 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.19□□□□□ -1.9
HDHD3Q9BSH5 SNORA31.9-201ENST00000516429 84 ntBASIC3.19□□□□□ -1.9
HDHD3Q9BSH5 RN7SKP209-201ENST00000516888 304 ntBASIC3.19□□□□□ -1.9
HDHD3Q9BSH5 AC022695.1-201ENST00000522089 237 ntBASIC3.19□□□□□ -1.9
HDHD3Q9BSH5 AC138701.1-201ENST00000524329 714 ntBASIC3.19□□□□□ -1.9
HDHD3Q9BSH5 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.19□□□□□ -1.9
HDHD3Q9BSH5 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.19□□□□□ -1.9
HDHD3Q9BSH5 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.19□□□□□ -1.9
HDHD3Q9BSH5 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC3.19□□□□□ -1.9
HDHD3Q9BSH5 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.19□□□□□ -1.9
HDHD3Q9BSH5 AC027104.1-201ENST00000563702 681 ntBASIC3.19□□□□□ -1.9
HDHD3Q9BSH5 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.19□□□□□ -1.9
HDHD3Q9BSH5 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.19□□□□□ -1.9
HDHD3Q9BSH5 MIR3939-201ENST00000582614 106 ntBASIC3.19□□□□□ -1.9
HDHD3Q9BSH5 AC069366.1-201ENST00000583159 838 ntBASIC3.19□□□□□ -1.9
HDHD3Q9BSH5 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.19□□□□□ -1.9
HDHD3Q9BSH5 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.19□□□□□ -1.9
HDHD3Q9BSH5 ABI1P1-201ENST00000603375 1120 ntBASIC3.19□□□□□ -1.9
HDHD3Q9BSH5 AC020910.2-201ENST00000603635 610 ntBASIC3.19□□□□□ -1.9
HDHD3Q9BSH5 AC026741.1-201ENST00000605892 482 ntBASIC3.19□□□□□ -1.9
HDHD3Q9BSH5 AC005014.3-201ENST00000605985 190 ntBASIC3.19□□□□□ -1.9
HDHD3Q9BSH5 AC016542.1-201ENST00000608259 493 ntBASIC3.19□□□□□ -1.9
HDHD3Q9BSH5 AC112503.2-201ENST00000609005 552 ntBASIC3.19□□□□□ -1.9
HDHD3Q9BSH5 AC073569.3-201ENST00000619055 682 ntBASIC3.19□□□□□ -1.9
HDHD3Q9BSH5 AC073342.3-201ENST00000624211 193 ntBASIC3.19□□□□□ -1.9
HDHD3Q9BSH5 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.19□□□□□ -1.9
HDHD3Q9BSH5 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HDHD3Q9BSH5 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
HDHD3Q9BSH5 AC022031.1-201ENST00000585985 2593 ntBASIC3.18□□□□□ -1.9
HDHD3Q9BSH5 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms