Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 OR8K4P-201ENST00000534608 872 ntBASIC3.86□□□□□ -1.79
RFT1Q96AA3 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.86□□□□□ -1.79
RFT1Q96AA3 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.86□□□□□ -1.79
RFT1Q96AA3 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.86□□□□□ -1.79
RFT1Q96AA3 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC3.86□□□□□ -1.79
RFT1Q96AA3 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.86□□□□□ -1.79
RFT1Q96AA3 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.86□□□□□ -1.79
RFT1Q96AA3 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.86□□□□□ -1.79
RFT1Q96AA3 AC245884.10-201ENST00000597355 337 ntBASIC3.86□□□□□ -1.79
RFT1Q96AA3 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC3.86□□□□□ -1.79
RFT1Q96AA3 AL390816.3-201ENST00000604527 1066 ntBASIC3.86□□□□□ -1.79
RFT1Q96AA3 Z82195.1-201ENST00000604558 398 ntBASIC3.86□□□□□ -1.79
RFT1Q96AA3 Z98200.1-201ENST00000607298 470 ntBASIC3.86□□□□□ -1.79
RFT1Q96AA3 AC133644.2-201ENST00000608142 540 ntBASIC3.86□□□□□ -1.79
RFT1Q96AA3 AP000255.1-201ENST00000610276 676 ntBASIC3.86□□□□□ -1.79
RFT1Q96AA3 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.86□□□□□ -1.79
RFT1Q96AA3 C2orf27A-204ENST00000623058 969 ntBASIC3.86□□□□□ -1.79
RFT1Q96AA3 AC104985.3-201ENST00000623479 597 ntBASIC3.86□□□□□ -1.79
RFT1Q96AA3 TEX41-256ENST00000626411 368 ntTSL 5 BASIC3.86□□□□□ -1.79
RFT1Q96AA3 AL445984.1-201ENST00000637834 659 ntBASIC3.86□□□□□ -1.79
RFT1Q96AA3 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.86□□□□□ -1.79
RFT1Q96AA3 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RFT1Q96AA3 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RFT1Q96AA3 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC3.86□□□□□ -1.79
RFT1Q96AA3 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
RFT1Q96AA3 AC106871.1-201ENST00000568324 3102 ntBASIC3.86□□□□□ -1.79
RFT1Q96AA3 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
RFT1Q96AA3 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
RFT1Q96AA3 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RFT1Q96AA3 Z82217.1-201ENST00000625157 8149 ntBASIC3.85□□□□□ -1.79
RFT1Q96AA3 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
RFT1Q96AA3 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RFT1Q96AA3 RNU6-839P-201ENST00000363347 108 ntBASIC3.85□□□□□ -1.79
RFT1Q96AA3 RNU6-1243P-201ENST00000364028 107 ntBASIC3.85□□□□□ -1.79
RFT1Q96AA3 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RFT1Q96AA3 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RFT1Q96AA3 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
RFT1Q96AA3 ENSAP1-201ENST00000392855 326 ntBASIC3.85□□□□□ -1.79
RFT1Q96AA3 AL645927.1-201ENST00000396783 406 ntBASIC3.85□□□□□ -1.79
RFT1Q96AA3 TMSB4XP8-201ENST00000402089 135 ntBASIC3.85□□□□□ -1.79
RFT1Q96AA3 GSTA8P-201ENST00000404253 637 ntBASIC3.85□□□□□ -1.79
RFT1Q96AA3 BTBD10P2-201ENST00000404779 676 ntBASIC3.85□□□□□ -1.79
RFT1Q96AA3 RPS20P14-201ENST00000412545 360 ntBASIC3.85□□□□□ -1.79
RFT1Q96AA3 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RFT1Q96AA3 TMSB4XP6-201ENST00000415187 135 ntBASIC3.85□□□□□ -1.79
RFT1Q96AA3 RPL31P45-201ENST00000419532 356 ntBASIC3.85□□□□□ -1.79
RFT1Q96AA3 TMSB4XP1-201ENST00000424567 135 ntBASIC3.85□□□□□ -1.79
RFT1Q96AA3 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC3.85□□□□□ -1.79
RFT1Q96AA3 RPP40P1-201ENST00000426762 456 ntBASIC3.85□□□□□ -1.79
RFT1Q96AA3 AC104837.2-201ENST00000427236 424 ntBASIC3.85□□□□□ -1.79
RFT1Q96AA3 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.85□□□□□ -1.79
RFT1Q96AA3 IFNNP1-201ENST00000429219 553 ntBASIC3.85□□□□□ -1.79
RFT1Q96AA3 RPL36P19-201ENST00000430744 301 ntBASIC3.85□□□□□ -1.79
RFT1Q96AA3 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RFT1Q96AA3 PPIAP17-201ENST00000438507 471 ntBASIC3.85□□□□□ -1.79
RFT1Q96AA3 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC3.85□□□□□ -1.79
RFT1Q96AA3 ABCF2P2-201ENST00000450549 296 ntBASIC3.85□□□□□ -1.79
RFT1Q96AA3 RPL7P61-201ENST00000451721 751 ntBASIC3.85□□□□□ -1.79
RFT1Q96AA3 HMGB3P22-202ENST00000451823 572 ntBASIC3.85□□□□□ -1.79
RFT1Q96AA3 BX276092.4-201ENST00000452056 248 ntBASIC3.85□□□□□ -1.79
RFT1Q96AA3 TVP23BP2-201ENST00000455082 615 ntBASIC3.85□□□□□ -1.79
RFT1Q96AA3 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.85□□□□□ -1.79
RFT1Q96AA3 AC087879.1-201ENST00000474343 374 ntBASIC3.85□□□□□ -1.79
RFT1Q96AA3 RN7SL177P-201ENST00000476596 299 ntBASIC3.85□□□□□ -1.79
RFT1Q96AA3 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RFT1Q96AA3 AC012170.1-201ENST00000495139 359 ntBASIC3.85□□□□□ -1.79
RFT1Q96AA3 NIPA2P2-201ENST00000496376 1083 ntBASIC3.85□□□□□ -1.79
RFT1Q96AA3 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.85□□□□□ -1.79
RFT1Q96AA3 SNX5P1-201ENST00000505757 1041 ntBASIC3.85□□□□□ -1.79
RFT1Q96AA3 AC048346.1-201ENST00000510247 144 ntBASIC3.85□□□□□ -1.79
RFT1Q96AA3 AC023632.1-201ENST00000518463 375 ntBASIC3.85□□□□□ -1.79
RFT1Q96AA3 AP001207.1-201ENST00000524051 481 ntBASIC3.85□□□□□ -1.79
RFT1Q96AA3 CARD16-203ENST00000525374 503 ntTSL 3 BASIC3.85□□□□□ -1.79
RFT1Q96AA3 DEFB130C-202ENST00000530001 230 ntBASIC3.85□□□□□ -1.79
RFT1Q96AA3 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.85□□□□□ -1.79
RFT1Q96AA3 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
RFT1Q96AA3 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RFT1Q96AA3 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
RFT1Q96AA3 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.85□□□□□ -1.79
RFT1Q96AA3 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.85□□□□□ -1.79
RFT1Q96AA3 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC3.85□□□□□ -1.79
RFT1Q96AA3 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC3.85□□□□□ -1.79
RFT1Q96AA3 AC044860.2-201ENST00000561005 179 ntBASIC3.85□□□□□ -1.79
RFT1Q96AA3 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC3.85□□□□□ -1.79
RFT1Q96AA3 MIR3934-201ENST00000579806 107 ntBASIC3.85□□□□□ -1.79
RFT1Q96AA3 MIR4646-201ENST00000580775 63 ntBASIC3.85□□□□□ -1.79
RFT1Q96AA3 BPIFA4P-203ENST00000603168 689 ntBASIC3.85□□□□□ -1.79
RFT1Q96AA3 AC069431.2-201ENST00000604149 1099 ntBASIC3.85□□□□□ -1.79
RFT1Q96AA3 AL133338.2-201ENST00000604292 736 ntBASIC3.85□□□□□ -1.79
RFT1Q96AA3 AC073387.2-201ENST00000604797 784 ntBASIC3.85□□□□□ -1.79
RFT1Q96AA3 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC3.85□□□□□ -1.79
RFT1Q96AA3 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.85□□□□□ -1.79
RFT1Q96AA3 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.85□□□□□ -1.79
RFT1Q96AA3 AC084824.4-201ENST00000620106 731 ntBASIC3.85□□□□□ -1.79
RFT1Q96AA3 AC068870.2-201ENST00000620635 389 ntBASIC3.85□□□□□ -1.79
RFT1Q96AA3 AC004943.3-201ENST00000624116 600 ntBASIC3.85□□□□□ -1.79
RFT1Q96AA3 AC073342.3-201ENST00000624211 193 ntBASIC3.85□□□□□ -1.79
RFT1Q96AA3 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
RFT1Q96AA3 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
RFT1Q96AA3 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms