Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
COL22A1Q8NFW1 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.6□□□□□ -1.67
COL22A1Q8NFW1 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
COL22A1Q8NFW1 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
COL22A1Q8NFW1 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
COL22A1Q8NFW1 MIR449A-201ENST00000362113 91 ntBASIC4.59□□□□□ -1.67
COL22A1Q8NFW1 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
COL22A1Q8NFW1 PTP4A1P1-201ENST00000420539 515 ntBASIC4.59□□□□□ -1.67
COL22A1Q8NFW1 OOSP1P1-201ENST00000423265 274 ntBASIC4.59□□□□□ -1.67
COL22A1Q8NFW1 AC096638.2-201ENST00000434965 711 ntBASIC4.59□□□□□ -1.67
COL22A1Q8NFW1 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.59□□□□□ -1.67
COL22A1Q8NFW1 AC006028.1-201ENST00000438379 402 ntBASIC4.59□□□□□ -1.67
COL22A1Q8NFW1 RN7SL863P-201ENST00000462370 296 ntBASIC4.59□□□□□ -1.67
COL22A1Q8NFW1 RN7SL594P-201ENST00000470590 287 ntBASIC4.59□□□□□ -1.67
COL22A1Q8NFW1 AC098583.1-201ENST00000480875 255 ntBASIC4.59□□□□□ -1.67
COL22A1Q8NFW1 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.59□□□□□ -1.67
COL22A1Q8NFW1 AC112198.1-201ENST00000505369 1220 ntBASIC4.59□□□□□ -1.67
COL22A1Q8NFW1 RN7SKP209-201ENST00000516888 304 ntBASIC4.59□□□□□ -1.67
COL22A1Q8NFW1 AP006245.1-201ENST00000522549 120 ntBASIC4.59□□□□□ -1.67
COL22A1Q8NFW1 EIF4EP5-201ENST00000528228 640 ntBASIC4.59□□□□□ -1.67
COL22A1Q8NFW1 AL358913.1-201ENST00000554342 121 ntBASIC4.59□□□□□ -1.67
COL22A1Q8NFW1 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.59□□□□□ -1.67
COL22A1Q8NFW1 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.59□□□□□ -1.67
COL22A1Q8NFW1 AC091905.1-201ENST00000624400 311 ntBASIC4.59□□□□□ -1.67
COL22A1Q8NFW1 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
COL22A1Q8NFW1 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.68
COL22A1Q8NFW1 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.68
COL22A1Q8NFW1 MUC2-202ENST00000613187 4845 ntBASIC4.59□□□□□ -1.68
COL22A1Q8NFW1 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
COL22A1Q8NFW1 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
COL22A1Q8NFW1 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
COL22A1Q8NFW1 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.58□□□□□ -1.68
COL22A1Q8NFW1 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL22A1Q8NFW1 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
COL22A1Q8NFW1 AL138885.1-201ENST00000405921 675 ntBASIC4.58□□□□□ -1.68
COL22A1Q8NFW1 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.58□□□□□ -1.68
COL22A1Q8NFW1 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.58□□□□□ -1.68
COL22A1Q8NFW1 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.58□□□□□ -1.68
COL22A1Q8NFW1 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.58□□□□□ -1.68
COL22A1Q8NFW1 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.58□□□□□ -1.68
COL22A1Q8NFW1 HNRNPDLP4-201ENST00000605144 301 ntBASIC4.58□□□□□ -1.68
COL22A1Q8NFW1 AC015802.5-201ENST00000607478 399 ntBASIC4.58□□□□□ -1.68
COL22A1Q8NFW1 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC4.58□□□□□ -1.68
COL22A1Q8NFW1 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC4.58□□□□□ -1.68
COL22A1Q8NFW1 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
COL22A1Q8NFW1 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
COL22A1Q8NFW1 SAGE4P-201ENST00000442271 3381 ntBASIC4.58□□□□□ -1.68
COL22A1Q8NFW1 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.58□□□□□ -1.68
COL22A1Q8NFW1 AC005183.1-201ENST00000603687 1979 ntBASIC4.58□□□□□ -1.68
COL22A1Q8NFW1 HSPA8P19-201ENST00000505359 1517 ntBASIC4.58□□□□□ -1.68
COL22A1Q8NFW1 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.58□□□□□ -1.68
COL22A1Q8NFW1 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL22A1Q8NFW1 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.58□□□□□ -1.68
COL22A1Q8NFW1 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.58□□□□□ -1.68
COL22A1Q8NFW1 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL22A1Q8NFW1 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.57□□□□□ -1.68
COL22A1Q8NFW1 HMGN1P24-201ENST00000412282 298 ntBASIC4.57□□□□□ -1.68
COL22A1Q8NFW1 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.57□□□□□ -1.68
COL22A1Q8NFW1 AC239809.1-201ENST00000450470 217 ntBASIC4.57□□□□□ -1.68
COL22A1Q8NFW1 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
COL22A1Q8NFW1 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.57□□□□□ -1.68
COL22A1Q8NFW1 RPL7L1P13-201ENST00000511702 739 ntBASIC4.57□□□□□ -1.68
COL22A1Q8NFW1 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.57□□□□□ -1.68
COL22A1Q8NFW1 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.57□□□□□ -1.68
COL22A1Q8NFW1 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
COL22A1Q8NFW1 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC4.57□□□□□ -1.68
COL22A1Q8NFW1 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.57□□□□□ -1.68
COL22A1Q8NFW1 AL590240.3-201ENST00000621416 943 ntBASIC4.57□□□□□ -1.68
COL22A1Q8NFW1 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
COL22A1Q8NFW1 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
COL22A1Q8NFW1 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
COL22A1Q8NFW1 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
COL22A1Q8NFW1 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL22A1Q8NFW1 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.57□□□□□ -1.68
COL22A1Q8NFW1 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL22A1Q8NFW1 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.57□□□□□ -1.68
COL22A1Q8NFW1 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.57□□□□□ -1.68
COL22A1Q8NFW1 AC019072.1-201ENST00000604535 1551 ntBASIC4.57□□□□□ -1.68
COL22A1Q8NFW1 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL22A1Q8NFW1 AC062016.1-201ENST00000355719 319 ntBASIC4.57□□□□□ -1.68
COL22A1Q8NFW1 AC098592.2-201ENST00000413158 265 ntBASIC4.57□□□□□ -1.68
COL22A1Q8NFW1 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC4.57□□□□□ -1.68
COL22A1Q8NFW1 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.57□□□□□ -1.68
COL22A1Q8NFW1 YWHAEP5-201ENST00000431545 765 ntBASIC4.57□□□□□ -1.68
COL22A1Q8NFW1 ATP5HP2-201ENST00000433885 485 ntBASIC4.57□□□□□ -1.68
COL22A1Q8NFW1 MTCO3P17-201ENST00000443775 513 ntBASIC4.57□□□□□ -1.68
COL22A1Q8NFW1 RPS4XP2-201ENST00000458402 793 ntBASIC4.57□□□□□ -1.68
COL22A1Q8NFW1 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.57□□□□□ -1.68
COL22A1Q8NFW1 AC004924.1-201ENST00000480160 781 ntBASIC4.57□□□□□ -1.68
COL22A1Q8NFW1 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC4.57□□□□□ -1.68
COL22A1Q8NFW1 AL360157.1-201ENST00000565962 87 ntBASIC4.57□□□□□ -1.68
COL22A1Q8NFW1 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.57□□□□□ -1.68
COL22A1Q8NFW1 MIR486-1-201ENST00000612171 68 ntBASIC4.57□□□□□ -1.68
COL22A1Q8NFW1 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC4.57□□□□□ -1.68
COL22A1Q8NFW1 AC105227.2-201ENST00000615075 605 ntBASIC4.57□□□□□ -1.68
COL22A1Q8NFW1 AC007998.5-201ENST00000622938 237 ntBASIC4.57□□□□□ -1.68
COL22A1Q8NFW1 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
COL22A1Q8NFW1 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
COL22A1Q8NFW1 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
COL22A1Q8NFW1 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms