Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 DDX39BP2-208ENST00000453923 258 ntBASIC5□□□□□ -1.61
SLC44A3Q8N4M1 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC5□□□□□ -1.61
SLC44A3Q8N4M1 RPL7AP10-201ENST00000481016 791 ntBASIC5□□□□□ -1.61
SLC44A3Q8N4M1 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC5□□□□□ -1.61
SLC44A3Q8N4M1 ACTG1P13-201ENST00000486987 1043 ntBASIC5□□□□□ -1.61
SLC44A3Q8N4M1 AC025674.1-201ENST00000507074 324 ntBASIC5□□□□□ -1.61
SLC44A3Q8N4M1 SLC25A15P5-201ENST00000508033 253 ntBASIC5□□□□□ -1.61
SLC44A3Q8N4M1 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC5□□□□□ -1.61
SLC44A3Q8N4M1 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC5□□□□□ -1.61
SLC44A3Q8N4M1 RNU6-513P-201ENST00000516104 104 ntBASIC5□□□□□ -1.61
SLC44A3Q8N4M1 SMARCE1P4-201ENST00000523647 241 ntBASIC5□□□□□ -1.61
SLC44A3Q8N4M1 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5□□□□□ -1.61
SLC44A3Q8N4M1 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5□□□□□ -1.61
SLC44A3Q8N4M1 AC068993.1-201ENST00000546724 589 ntBASIC5□□□□□ -1.61
SLC44A3Q8N4M1 AC133555.2-201ENST00000550213 292 ntBASIC5□□□□□ -1.61
SLC44A3Q8N4M1 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC5□□□□□ -1.61
SLC44A3Q8N4M1 AC245505.1-201ENST00000556398 224 ntBASIC5□□□□□ -1.61
SLC44A3Q8N4M1 OR4G1P-201ENST00000588632 938 ntBASIC5□□□□□ -1.61
SLC44A3Q8N4M1 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5□□□□□ -1.61
SLC44A3Q8N4M1 AC010424.2-201ENST00000607594 443 ntBASIC5□□□□□ -1.61
SLC44A3Q8N4M1 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SLC44A3Q8N4M1 MIR6716-201ENST00000613413 80 ntBASIC5□□□□□ -1.61
SLC44A3Q8N4M1 AL049794.2-201ENST00000616301 365 ntBASIC5□□□□□ -1.61
SLC44A3Q8N4M1 AL356266.1-201ENST00000623311 483 ntBASIC5□□□□□ -1.61
SLC44A3Q8N4M1 U6.107-201ENST00000637108 79 ntBASIC5□□□□□ -1.61
SLC44A3Q8N4M1 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
SLC44A3Q8N4M1 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5□□□□□ -1.61
SLC44A3Q8N4M1 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
SLC44A3Q8N4M1 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5□□□□□ -1.61
SLC44A3Q8N4M1 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5□□□□□ -1.61
SLC44A3Q8N4M1 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.99□□□□□ -1.61
SLC44A3Q8N4M1 AC109315.1-201ENST00000584143 1347 ntBASIC4.99□□□□□ -1.61
SLC44A3Q8N4M1 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.99□□□□□ -1.61
SLC44A3Q8N4M1 CCT8P1-201ENST00000413611 1657 ntBASIC4.99□□□□□ -1.61
SLC44A3Q8N4M1 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.99□□□□□ -1.61
SLC44A3Q8N4M1 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SLC44A3Q8N4M1 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
SLC44A3Q8N4M1 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SLC44A3Q8N4M1 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.99□□□□□ -1.61
SLC44A3Q8N4M1 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.99□□□□□ -1.61
SLC44A3Q8N4M1 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
SLC44A3Q8N4M1 RNA5SP345-201ENST00000410646 108 ntBASIC4.99□□□□□ -1.61
SLC44A3Q8N4M1 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC4.99□□□□□ -1.61
SLC44A3Q8N4M1 EIF1P1-201ENST00000421436 341 ntBASIC4.99□□□□□ -1.61
SLC44A3Q8N4M1 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC4.99□□□□□ -1.61
SLC44A3Q8N4M1 MTCO1P54-201ENST00000430139 712 ntBASIC4.99□□□□□ -1.61
SLC44A3Q8N4M1 TCEA1P3-201ENST00000443005 880 ntBASIC4.99□□□□□ -1.61
SLC44A3Q8N4M1 AL592447.1-201ENST00000447592 540 ntBASIC4.99□□□□□ -1.61
SLC44A3Q8N4M1 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SLC44A3Q8N4M1 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.99□□□□□ -1.61
SLC44A3Q8N4M1 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.99□□□□□ -1.61
SLC44A3Q8N4M1 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC4.99□□□□□ -1.61
SLC44A3Q8N4M1 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.99□□□□□ -1.61
SLC44A3Q8N4M1 AC026402.1-201ENST00000513642 170 ntBASIC4.99□□□□□ -1.61
SLC44A3Q8N4M1 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.99□□□□□ -1.61
SLC44A3Q8N4M1 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.99□□□□□ -1.61
SLC44A3Q8N4M1 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC4.99□□□□□ -1.61
SLC44A3Q8N4M1 AC025260.1-201ENST00000548858 430 ntBASIC4.99□□□□□ -1.61
SLC44A3Q8N4M1 AC008126.1-201ENST00000549019 480 ntBASIC4.99□□□□□ -1.61
SLC44A3Q8N4M1 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SLC44A3Q8N4M1 AL109766.1-201ENST00000555080 552 ntBASIC4.99□□□□□ -1.61
SLC44A3Q8N4M1 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.99□□□□□ -1.61
SLC44A3Q8N4M1 AC068831.4-201ENST00000556118 109 ntBASIC4.99□□□□□ -1.61
SLC44A3Q8N4M1 NIFKP8-201ENST00000560500 874 ntBASIC4.99□□□□□ -1.61
SLC44A3Q8N4M1 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.99□□□□□ -1.61
SLC44A3Q8N4M1 OR4K7P-201ENST00000580232 945 ntBASIC4.99□□□□□ -1.61
SLC44A3Q8N4M1 AP005262.1-201ENST00000582646 997 ntBASIC4.99□□□□□ -1.61
SLC44A3Q8N4M1 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.99□□□□□ -1.61
SLC44A3Q8N4M1 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.99□□□□□ -1.61
SLC44A3Q8N4M1 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.99□□□□□ -1.61
SLC44A3Q8N4M1 AL606834.2-201ENST00000602954 668 ntBASIC4.99□□□□□ -1.61
SLC44A3Q8N4M1 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.99□□□□□ -1.61
SLC44A3Q8N4M1 Z95327.3-201ENST00000610385 572 ntBASIC4.99□□□□□ -1.61
SLC44A3Q8N4M1 MIR7844-201ENST00000616161 122 ntBASIC4.99□□□□□ -1.61
SLC44A3Q8N4M1 AL008636.1-201ENST00000625038 1018 ntBASIC4.99□□□□□ -1.61
SLC44A3Q8N4M1 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SLC44A3Q8N4M1 AC099063.3-201ENST00000642066 185 ntBASIC4.99□□□□□ -1.61
SLC44A3Q8N4M1 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.99□□□□□ -1.61
SLC44A3Q8N4M1 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SLC44A3Q8N4M1 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.99□□□□□ -1.61
SLC44A3Q8N4M1 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SLC44A3Q8N4M1 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
SLC44A3Q8N4M1 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SLC44A3Q8N4M1 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.99□□□□□ -1.61
SLC44A3Q8N4M1 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SLC44A3Q8N4M1 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SLC44A3Q8N4M1 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
SLC44A3Q8N4M1 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SLC44A3Q8N4M1 AC015813.6-201ENST00000624409 5808 ntBASIC4.98□□□□□ -1.61
SLC44A3Q8N4M1 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
SLC44A3Q8N4M1 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
SLC44A3Q8N4M1 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.98□□□□□ -1.61
SLC44A3Q8N4M1 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.98□□□□□ -1.61
SLC44A3Q8N4M1 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SLC44A3Q8N4M1 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.98□□□□□ -1.61
SLC44A3Q8N4M1 Y_RNA.88-201ENST00000363029 99 ntBASIC4.98□□□□□ -1.61
SLC44A3Q8N4M1 Y_RNA.248-201ENST00000364501 109 ntBASIC4.98□□□□□ -1.61
SLC44A3Q8N4M1 RNU6-452P-201ENST00000384406 107 ntBASIC4.98□□□□□ -1.61
SLC44A3Q8N4M1 EI24P3-201ENST00000399046 1062 ntBASIC4.98□□□□□ -1.61
SLC44A3Q8N4M1 AL035079.1-201ENST00000405210 287 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms