Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 RNY4P14-201ENST00000363656 96 ntBASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 RNA5SP335-201ENST00000363817 110 ntBASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 RNU6-761P-201ENST00000384148 107 ntBASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 RNA5SP187-201ENST00000384400 119 ntBASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 SNORD56.6-201ENST00000384569 71 ntBASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 FGF7P8-201ENST00000402994 292 ntBASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 USP9YP36-201ENST00000424581 829 ntBASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 BX890604.2-201ENST00000427883 474 ntBASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 MTCO3P21-201ENST00000430791 643 ntBASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 AC138761.5-201ENST00000433967 325 ntBASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 PPIAP13-201ENST00000434706 478 ntBASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 AP000936.3-201ENST00000438127 255 ntBASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 MTCO1P42-201ENST00000457379 726 ntBASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 AC011225.1-201ENST00000457751 369 ntBASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 RPL38P1-201ENST00000460914 211 ntBASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 RPL21P71-201ENST00000465598 459 ntBASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 RPS4XP1-201ENST00000482189 787 ntBASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 KCTD9P2-201ENST00000512203 1013 ntBASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 AC068587.4-201ENST00000533893 186 ntBASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 RPL21P5-201ENST00000554662 472 ntBASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 AC017100.2-201ENST00000584628 355 ntBASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 AC104785.1-201ENST00000603220 588 ntBASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 AC112230.1-201ENST00000604342 547 ntBASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 AC016727.1-205ENST00000605437 569 ntBASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 AC104260.1-201ENST00000616660 539 ntBASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 AP005264.7-201ENST00000625003 745 ntBASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 AC006378.2-201ENST00000623178 2476 ntBASIC5.32□□□□□ -1.56
TRIM48Q8IWZ4 RBPJP2-201ENST00000618187 1444 ntBASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 TRIM51GP-201ENST00000534741 1350 ntBASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 OR11H4-201ENST00000315409 1082 ntBASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 Y_RNA.38-201ENST00000362617 102 ntBASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 Y_RNA.409-201ENST00000383990 98 ntBASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 MIR223-201ENST00000385204 110 ntBASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 AL133388.1-201ENST00000404509 287 ntBASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 MIR1178-201ENST00000408396 91 ntBASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 RNU2-65P-201ENST00000410162 185 ntBASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 Y_RNA.608-201ENST00000410647 95 ntBASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 RNU4-55P-201ENST00000410731 137 ntBASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 ISCA1P6-201ENST00000427740 390 ntBASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 AC109583.1-201ENST00000432156 268 ntBASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 RPL12P17-201ENST00000432393 498 ntBASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 MTCO3P18-201ENST00000440206 761 ntBASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 MTND6P13-201ENST00000443510 523 ntBASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 AC090142.1-201ENST00000465776 462 ntBASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 COPS8P2-201ENST00000473228 627 ntBASIC5.31□□□□□ -1.56
TRIM48Q8IWZ4 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms