Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC3.78□□□□□ -1.8
CDKL3Q8IVW4 CFTRP1-201ENST00000456646 183 ntBASIC3.78□□□□□ -1.8
CDKL3Q8IVW4 ELOCP12-201ENST00000458706 328 ntBASIC3.78□□□□□ -1.8
CDKL3Q8IVW4 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC3.78□□□□□ -1.8
CDKL3Q8IVW4 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.78□□□□□ -1.8
CDKL3Q8IVW4 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CDKL3Q8IVW4 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.78□□□□□ -1.8
CDKL3Q8IVW4 OR8R1P-201ENST00000543943 764 ntBASIC3.78□□□□□ -1.8
CDKL3Q8IVW4 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.78□□□□□ -1.8
CDKL3Q8IVW4 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.78□□□□□ -1.8
CDKL3Q8IVW4 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.78□□□□□ -1.8
CDKL3Q8IVW4 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.78□□□□□ -1.8
CDKL3Q8IVW4 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CDKL3Q8IVW4 NF1P5-201ENST00000588287 448 ntBASIC3.78□□□□□ -1.8
CDKL3Q8IVW4 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC3.78□□□□□ -1.8
CDKL3Q8IVW4 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CDKL3Q8IVW4 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CDKL3Q8IVW4 AC243654.2-201ENST00000612843 443 ntBASIC3.78□□□□□ -1.8
CDKL3Q8IVW4 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC3.78□□□□□ -1.8
CDKL3Q8IVW4 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CDKL3Q8IVW4 AL391597.1-201ENST00000618707 694 ntBASIC3.78□□□□□ -1.8
CDKL3Q8IVW4 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CDKL3Q8IVW4 AC068724.3-201ENST00000625906 87 ntBASIC3.78□□□□□ -1.8
CDKL3Q8IVW4 USP8P1-201ENST00000494673 3183 ntBASIC3.78□□□□□ -1.8
CDKL3Q8IVW4 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CDKL3Q8IVW4 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.78□□□□□ -1.8
CDKL3Q8IVW4 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.78□□□□□ -1.8
CDKL3Q8IVW4 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CDKL3Q8IVW4 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.78□□□□□ -1.8
CDKL3Q8IVW4 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CDKL3Q8IVW4 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CDKL3Q8IVW4 MTND4P10-201ENST00000446199 1363 ntBASIC3.77□□□□□ -1.81
CDKL3Q8IVW4 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.77□□□□□ -1.81
CDKL3Q8IVW4 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CDKL3Q8IVW4 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CDKL3Q8IVW4 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.77□□□□□ -1.81
CDKL3Q8IVW4 RNU1-87P-201ENST00000363727 170 ntBASIC3.77□□□□□ -1.81
CDKL3Q8IVW4 MTHFD2P2-201ENST00000407725 247 ntBASIC3.77□□□□□ -1.81
CDKL3Q8IVW4 AJ239321.1-201ENST00000424255 564 ntBASIC3.77□□□□□ -1.81
CDKL3Q8IVW4 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CDKL3Q8IVW4 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.77□□□□□ -1.81
CDKL3Q8IVW4 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.77□□□□□ -1.81
CDKL3Q8IVW4 AC010655.1-201ENST00000449336 292 ntBASIC3.77□□□□□ -1.81
CDKL3Q8IVW4 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.77□□□□□ -1.81
CDKL3Q8IVW4 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC3.77□□□□□ -1.81
CDKL3Q8IVW4 UBDP1-202ENST00000457888 382 ntBASIC3.77□□□□□ -1.81
CDKL3Q8IVW4 RNU7-170P-201ENST00000459303 61 ntBASIC3.77□□□□□ -1.81
CDKL3Q8IVW4 RPL23AP73-201ENST00000492507 471 ntBASIC3.77□□□□□ -1.81
CDKL3Q8IVW4 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC3.77□□□□□ -1.81
CDKL3Q8IVW4 HMGB1P21-201ENST00000502313 581 ntBASIC3.77□□□□□ -1.81
CDKL3Q8IVW4 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.77□□□□□ -1.81
CDKL3Q8IVW4 AC034244.2-201ENST00000514668 858 ntBASIC3.77□□□□□ -1.81
CDKL3Q8IVW4 RNU2-58P-201ENST00000516403 183 ntBASIC3.77□□□□□ -1.81
CDKL3Q8IVW4 IGKV2-23-201ENST00000518729 323 ntBASIC3.77□□□□□ -1.81
CDKL3Q8IVW4 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC3.77□□□□□ -1.81
CDKL3Q8IVW4 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.77□□□□□ -1.81
CDKL3Q8IVW4 OR5AP1P-201ENST00000529730 940 ntBASIC3.77□□□□□ -1.81
CDKL3Q8IVW4 CASP1-216ENST00000534497 825 ntTSL 5 BASIC3.77□□□□□ -1.81
CDKL3Q8IVW4 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.77□□□□□ -1.81
CDKL3Q8IVW4 RN7SL703P-201ENST00000578485 302 ntBASIC3.77□□□□□ -1.81
CDKL3Q8IVW4 AC022884.3-201ENST00000579571 248 ntBASIC3.77□□□□□ -1.81
CDKL3Q8IVW4 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.77□□□□□ -1.81
CDKL3Q8IVW4 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.77□□□□□ -1.81
CDKL3Q8IVW4 AP003117.2-201ENST00000606010 545 ntBASIC3.77□□□□□ -1.81
CDKL3Q8IVW4 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC3.77□□□□□ -1.81
CDKL3Q8IVW4 AC019080.5-201ENST00000624891 757 ntBASIC3.77□□□□□ -1.81
CDKL3Q8IVW4 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.77□□□□□ -1.81
CDKL3Q8IVW4 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.77□□□□□ -1.81
CDKL3Q8IVW4 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
CDKL3Q8IVW4 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
CDKL3Q8IVW4 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
CDKL3Q8IVW4 RNU4-23P-201ENST00000362839 140 ntBASIC3.76□□□□□ -1.81
CDKL3Q8IVW4 RNU6-670P-201ENST00000364312 104 ntBASIC3.76□□□□□ -1.81
CDKL3Q8IVW4 RNA5SP479-201ENST00000364858 117 ntBASIC3.76□□□□□ -1.81
CDKL3Q8IVW4 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CDKL3Q8IVW4 RPL32P23-201ENST00000397237 405 ntBASIC3.76□□□□□ -1.81
CDKL3Q8IVW4 RNU2-37P-201ENST00000410695 177 ntBASIC3.76□□□□□ -1.81
CDKL3Q8IVW4 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.76□□□□□ -1.81
CDKL3Q8IVW4 MRPS18BP2-201ENST00000434310 759 ntBASIC3.76□□□□□ -1.81
CDKL3Q8IVW4 RNU7-27P-201ENST00000459281 62 ntBASIC3.76□□□□□ -1.81
CDKL3Q8IVW4 SNRPGP3-201ENST00000469405 227 ntBASIC3.76□□□□□ -1.81
CDKL3Q8IVW4 AC078785.3-201ENST00000476607 425 ntBASIC3.76□□□□□ -1.81
CDKL3Q8IVW4 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.76□□□□□ -1.81
CDKL3Q8IVW4 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.76□□□□□ -1.81
CDKL3Q8IVW4 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.76□□□□□ -1.81
CDKL3Q8IVW4 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
CDKL3Q8IVW4 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.76□□□□□ -1.81
CDKL3Q8IVW4 BNIP3P5-201ENST00000562290 498 ntBASIC3.76□□□□□ -1.81
CDKL3Q8IVW4 AC007224.1-201ENST00000564410 144 ntBASIC3.76□□□□□ -1.81
CDKL3Q8IVW4 MIR3160-1-201ENST00000577972 85 ntBASIC3.76□□□□□ -1.81
CDKL3Q8IVW4 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.76□□□□□ -1.81
CDKL3Q8IVW4 MIR5187-201ENST00000583479 76 ntBASIC3.76□□□□□ -1.81
CDKL3Q8IVW4 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.76□□□□□ -1.81
CDKL3Q8IVW4 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.76□□□□□ -1.81
CDKL3Q8IVW4 HMGB1P51-201ENST00000605166 638 ntBASIC3.76□□□□□ -1.81
CDKL3Q8IVW4 AC090912.3-201ENST00000609775 533 ntBASIC3.76□□□□□ -1.81
CDKL3Q8IVW4 AL391261.4-201ENST00000616012 481 ntBASIC3.76□□□□□ -1.81
CDKL3Q8IVW4 AL732618.1-201ENST00000623251 301 ntBASIC3.76□□□□□ -1.81
CDKL3Q8IVW4 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.76□□□□□ -1.81
CDKL3Q8IVW4 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms