Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC4.88□□□□□ -1.63
VRK3Q8IV63 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.88□□□□□ -1.63
VRK3Q8IV63 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VRK3Q8IV63 RPS26P30-201ENST00000443431 335 ntBASIC4.88□□□□□ -1.63
VRK3Q8IV63 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.88□□□□□ -1.63
VRK3Q8IV63 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC4.88□□□□□ -1.63
VRK3Q8IV63 NFU1P2-201ENST00000448700 469 ntBASIC4.88□□□□□ -1.63
VRK3Q8IV63 MTND1P11-201ENST00000456661 876 ntBASIC4.88□□□□□ -1.63
VRK3Q8IV63 SNORD42A-201ENST00000459584 64 ntBASIC4.88□□□□□ -1.63
VRK3Q8IV63 AP000852.1-201ENST00000472460 573 ntBASIC4.88□□□□□ -1.63
VRK3Q8IV63 RPL7AP6-201ENST00000477943 801 ntBASIC4.88□□□□□ -1.63
VRK3Q8IV63 RPL5P22-201ENST00000480199 884 ntBASIC4.88□□□□□ -1.63
VRK3Q8IV63 AC073522.1-201ENST00000483312 377 ntBASIC4.88□□□□□ -1.63
VRK3Q8IV63 RPS4XP15-201ENST00000489210 795 ntBASIC4.88□□□□□ -1.63
VRK3Q8IV63 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.88□□□□□ -1.63
VRK3Q8IV63 DYNLL1P6-201ENST00000503440 264 ntBASIC4.88□□□□□ -1.63
VRK3Q8IV63 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC4.88□□□□□ -1.63
VRK3Q8IV63 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.88□□□□□ -1.63
VRK3Q8IV63 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.88□□□□□ -1.63
VRK3Q8IV63 RNU6-416P-201ENST00000516265 103 ntBASIC4.88□□□□□ -1.63
VRK3Q8IV63 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.88□□□□□ -1.63
VRK3Q8IV63 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC4.88□□□□□ -1.63
VRK3Q8IV63 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VRK3Q8IV63 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.88□□□□□ -1.63
VRK3Q8IV63 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.88□□□□□ -1.63
VRK3Q8IV63 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.88□□□□□ -1.63
VRK3Q8IV63 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.88□□□□□ -1.63
VRK3Q8IV63 CENPUP2-201ENST00000555897 1186 ntBASIC4.88□□□□□ -1.63
VRK3Q8IV63 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.88□□□□□ -1.63
VRK3Q8IV63 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.88□□□□□ -1.63
VRK3Q8IV63 AC020914.6-201ENST00000594327 272 ntBASIC4.88□□□□□ -1.63
VRK3Q8IV63 AL390838.2-201ENST00000602394 274 ntBASIC4.88□□□□□ -1.63
VRK3Q8IV63 AP000907.4-201ENST00000604143 237 ntBASIC4.88□□□□□ -1.63
VRK3Q8IV63 AC013244.1-201ENST00000604279 193 ntBASIC4.88□□□□□ -1.63
VRK3Q8IV63 AC087045.1-201ENST00000605856 382 ntBASIC4.88□□□□□ -1.63
VRK3Q8IV63 AL390208.1-201ENST00000605885 644 ntBASIC4.88□□□□□ -1.63
VRK3Q8IV63 AC009704.2-201ENST00000618739 483 ntBASIC4.88□□□□□ -1.63
VRK3Q8IV63 U6.107-201ENST00000637108 79 ntBASIC4.88□□□□□ -1.63
VRK3Q8IV63 AC073869.10-201ENST00000642016 354 ntBASIC4.88□□□□□ -1.63
VRK3Q8IV63 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
VRK3Q8IV63 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
VRK3Q8IV63 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
VRK3Q8IV63 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
VRK3Q8IV63 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
VRK3Q8IV63 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
VRK3Q8IV63 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
VRK3Q8IV63 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
VRK3Q8IV63 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VRK3Q8IV63 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
VRK3Q8IV63 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.88□□□□□ -1.63
VRK3Q8IV63 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.88□□□□□ -1.63
VRK3Q8IV63 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VRK3Q8IV63 AC007996.1-201ENST00000620414 2821 ntBASIC4.87□□□□□ -1.63
VRK3Q8IV63 MTCO1P23-201ENST00000415223 1526 ntBASIC4.87□□□□□ -1.63
VRK3Q8IV63 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
VRK3Q8IV63 AC104260.2-201ENST00000623551 3497 ntBASIC4.87□□□□□ -1.63
VRK3Q8IV63 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VRK3Q8IV63 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.87□□□□□ -1.63
VRK3Q8IV63 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.87□□□□□ -1.63
VRK3Q8IV63 HMGB1P5-201ENST00000255320 642 ntBASIC4.87□□□□□ -1.63
VRK3Q8IV63 AC103591.2-201ENST00000265259 766 ntBASIC4.87□□□□□ -1.63
VRK3Q8IV63 RN7SKP104-201ENST00000362605 328 ntBASIC4.87□□□□□ -1.63
VRK3Q8IV63 RNU6-374P-201ENST00000364146 108 ntBASIC4.87□□□□□ -1.63
VRK3Q8IV63 MIR525-201ENST00000384978 85 ntBASIC4.87□□□□□ -1.63
VRK3Q8IV63 AC013429.2-201ENST00000418798 781 ntBASIC4.87□□□□□ -1.63
VRK3Q8IV63 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.87□□□□□ -1.63
VRK3Q8IV63 AL512649.1-201ENST00000428997 581 ntBASIC4.87□□□□□ -1.63
VRK3Q8IV63 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.87□□□□□ -1.63
VRK3Q8IV63 RBMY2QP-201ENST00000429799 1147 ntBASIC4.87□□□□□ -1.63
VRK3Q8IV63 AL365184.2-201ENST00000431139 435 ntBASIC4.87□□□□□ -1.63
VRK3Q8IV63 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.87□□□□□ -1.63
VRK3Q8IV63 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.87□□□□□ -1.63
VRK3Q8IV63 CYCSP24-201ENST00000445119 316 ntBASIC4.87□□□□□ -1.63
VRK3Q8IV63 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.87□□□□□ -1.63
VRK3Q8IV63 AL118496.2-201ENST00000448300 230 ntBASIC4.87□□□□□ -1.63
VRK3Q8IV63 snoU13.20-201ENST00000459180 104 ntBASIC4.87□□□□□ -1.63
VRK3Q8IV63 AC092989.1-201ENST00000481235 277 ntBASIC4.87□□□□□ -1.63
VRK3Q8IV63 AC090013.1-201ENST00000485147 480 ntBASIC4.87□□□□□ -1.63
VRK3Q8IV63 AC079382.1-201ENST00000493346 557 ntBASIC4.87□□□□□ -1.63
VRK3Q8IV63 MTCYBP18-201ENST00000501056 747 ntBASIC4.87□□□□□ -1.63
VRK3Q8IV63 AC108941.1-201ENST00000502853 530 ntBASIC4.87□□□□□ -1.63
VRK3Q8IV63 AC138409.2-202ENST00000507274 458 ntBASIC4.87□□□□□ -1.63
VRK3Q8IV63 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.87□□□□□ -1.63
VRK3Q8IV63 ARL2BPP6-201ENST00000512757 439 ntBASIC4.87□□□□□ -1.63
VRK3Q8IV63 RNU6-1004P-201ENST00000516584 111 ntBASIC4.87□□□□□ -1.63
VRK3Q8IV63 RNA5SP392-201ENST00000516905 112 ntBASIC4.87□□□□□ -1.63
VRK3Q8IV63 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.87□□□□□ -1.63
VRK3Q8IV63 AC008802.1-201ENST00000519121 791 ntBASIC4.87□□□□□ -1.63
VRK3Q8IV63 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VRK3Q8IV63 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4.87□□□□□ -1.63
VRK3Q8IV63 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC4.87□□□□□ -1.63
VRK3Q8IV63 OR5AK1P-201ENST00000524837 922 ntBASIC4.87□□□□□ -1.63
VRK3Q8IV63 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.87□□□□□ -1.63
VRK3Q8IV63 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.87□□□□□ -1.63
VRK3Q8IV63 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC4.87□□□□□ -1.63
VRK3Q8IV63 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.87□□□□□ -1.63
VRK3Q8IV63 PSMB7P1-201ENST00000556349 514 ntBASIC4.87□□□□□ -1.63
VRK3Q8IV63 AC006960.3-201ENST00000561845 705 ntBASIC4.87□□□□□ -1.63
VRK3Q8IV63 PCMTD1P2-201ENST00000565017 355 ntBASIC4.87□□□□□ -1.63
VRK3Q8IV63 UBE2FP2-201ENST00000566646 462 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms